diff --git a/conf/modules/annotate_cadd.config b/conf/modules/annotate_cadd.config index 4ac5b618..404e71e5 100644 --- a/conf/modules/annotate_cadd.config +++ b/conf/modules/annotate_cadd.config @@ -21,7 +21,7 @@ process { } withName: '.*:ANNOTATE_CADD:BCFTOOLS_VIEW' { - ext.args = { "--output-type z --types indels" } + ext.args = { "--output-type z --types indels,other" } ext.prefix = { "${vcf.simpleName}_indels" } }