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I need suggestions and ideas to better connect the
Type of data:
Genetic data
Other NGS (genomics)
Cloned DNA
Transcriptomics
RNAseq
Metabolomics
Proteomics
Plant phenotypic data
Targeted assays (e.g. glucose and fructose content)
Image datasets
Models
Code Excel
The repositories:
NCBI-GenBank
NCBI-SRA (Sequence Read Archive)
NCBI-GEO (Gene Expression Omnibus)
EBI-ENA (European Nucleotide Archive)
EBI-ArrayExpress
EBI-Metabolights
EBI-PRIDE (PRoteomics IDEntifications Database)
EBI-BioImage Archive
IDR (Image Data Resource)
e!DAL-PGP (Plant Genomics & Phenomics Research Data Repository)
Metabolomics Workbench
PDB (Protein Data Bank)
Chebi (Chemical Entities of Biological Interest)
Other Endpoint Repositories:
The minimal information standards:
MIAPPE (Minimum Information About a Plant Phenotyping Experiment)
MIxS (Minimum Information about any (X) Sequence)
MigsEu (Minimum Information about a Genome Sequence: Eucaryote)
MigsOrg (Minimum Information about a Genome Sequence: Organelle)
MIMS (Minimum Information about Metagenome or Environmental)
MIMARKSSpecimen (Minimal Information about a Marker Specimen: Specimen)
MIMARKSSurvey (Minimal Information about a Marker Specimen: Survey)
MISAG (Minimum Information about a Single Amplified Genome)
MIMAG (Minimum Information about Metagenome-Assembled Genome)
MIAMET (Minimum Information About a METabolomics experiment)
MINSEQE (Minimum Information about a high-throughput SEQuencing Experiment)
REMBI (Recommended Metadata for Biological Images)
MIAPE (Minimum Information About a Proteomics Experiment)
MIMix (Molecular Interactions)
The text was updated successfully, but these errors were encountered:
I need suggestions and ideas to better connect the
Genetic data
Other NGS (genomics)
Cloned DNA
Transcriptomics
RNAseq
Metabolomics
Proteomics
Plant phenotypic data
Targeted assays (e.g. glucose and fructose content)
Image datasets
Models
Code
Excel
NCBI-GenBank
NCBI-SRA (Sequence Read Archive)
NCBI-GEO (Gene Expression Omnibus)
EBI-ENA (European Nucleotide Archive)
EBI-ArrayExpress
EBI-Metabolights
EBI-PRIDE (PRoteomics IDEntifications Database)
EBI-BioImage Archive
IDR (Image Data Resource)
e!DAL-PGP (Plant Genomics & Phenomics Research Data Repository)
Metabolomics Workbench
PDB (Protein Data Bank)
Chebi (Chemical Entities of Biological Interest)
Other Endpoint Repositories:
MIAPPE (Minimum Information About a Plant Phenotyping Experiment)
MIxS (Minimum Information about any (X) Sequence)
MigsEu (Minimum Information about a Genome Sequence: Eucaryote)
MigsOrg (Minimum Information about a Genome Sequence: Organelle)
MIMS (Minimum Information about Metagenome or Environmental)
MIMARKSSpecimen (Minimal Information about a Marker Specimen: Specimen)
MIMARKSSurvey (Minimal Information about a Marker Specimen: Survey)
MISAG (Minimum Information about a Single Amplified Genome)
MIMAG (Minimum Information about Metagenome-Assembled Genome)
MIAMET (Minimum Information About a METabolomics experiment)
MINSEQE (Minimum Information about a high-throughput SEQuencing Experiment)
REMBI (Recommended Metadata for Biological Images)
MIAPE (Minimum Information About a Proteomics Experiment)
MIMix (Molecular Interactions)
The text was updated successfully, but these errors were encountered: