diff --git a/sdcflows/workflows/fmap.py b/sdcflows/workflows/fmap.py index 8e12cde4bc..0b77484711 100644 --- a/sdcflows/workflows/fmap.py +++ b/sdcflows/workflows/fmap.py @@ -20,7 +20,7 @@ from nipype.pipeline import engine as pe from nipype.interfaces import utility as niu, fsl, ants -from nipype.workflows.dmri.fsl.utils import demean_image, cleanup_edge_pipeline +from niflow.nipype1.workflows.dmri.fsl.utils import demean_image, cleanup_edge_pipeline from niworkflows.engine.workflows import LiterateWorkflow as Workflow from niworkflows.interfaces.bids import DerivativesDataSink from niworkflows.interfaces.images import IntraModalMerge diff --git a/sdcflows/workflows/phdiff.py b/sdcflows/workflows/phdiff.py index 1857030155..748e7fde59 100644 --- a/sdcflows/workflows/phdiff.py +++ b/sdcflows/workflows/phdiff.py @@ -20,7 +20,7 @@ from nipype.interfaces import ants, fsl, utility as niu from nipype.pipeline import engine as pe -from nipype.workflows.dmri.fsl.utils import siemens2rads, demean_image, \ +from niflow.nipype1.workflows.dmri.fsl.utils import siemens2rads, demean_image, \ cleanup_edge_pipeline from niworkflows.engine.workflows import LiterateWorkflow as Workflow from niworkflows.interfaces.images import IntraModalMerge @@ -36,7 +36,7 @@ def init_phdiff_wf(omp_nthreads, name='phdiff_wf'): Estimates the fieldmap using a phase-difference image and one or more magnitude images corresponding to two or more :abbr:`GRE (Gradient Echo sequence)` acquisitions. The `original code was taken from nipype - `_. + `_. .. workflow :: :graph2use: orig diff --git a/setup.cfg b/setup.cfg index e83a80719a..5ca0631301 100644 --- a/setup.cfg +++ b/setup.cfg @@ -25,6 +25,7 @@ setup_requires = install_requires = nibabel >=2.2.1 nipype >=1.2.0 + niflow-nipype1-workflows ~=0.0.1 niworkflows ~=0.10 numpy pybids ~=0.9.2