From 18d6c10938fd69df94afa84115291fbcfbd0a269 Mon Sep 17 00:00:00 2001 From: JABelfiore Date: Mon, 6 Jan 2025 15:48:36 +0000 Subject: [PATCH 1/2] Def and refs --- src/ontology/cl-edit.owl | 9 +++++++++ 1 file changed, 9 insertions(+) diff --git a/src/ontology/cl-edit.owl b/src/ontology/cl-edit.owl index 6c65df477..d676028dd 100644 --- a/src/ontology/cl-edit.owl +++ b/src/ontology/cl-edit.owl @@ -3110,6 +3110,7 @@ Declaration(Class(obo:CL_4047030)) Declaration(Class(obo:CL_4047032)) Declaration(Class(obo:CL_4047034)) Declaration(Class(obo:CL_4047035)) +Declaration(Class(obo:CL_4047040)) Declaration(Class(obo:CL_4047051)) Declaration(Class(obo:CL_4047052)) Declaration(Class(obo:CL_4047101)) @@ -33097,6 +33098,14 @@ AnnotationAssertion(terms:date obo:CL_4047035 "2024-12-05T16:13:49Z"^^xsd:dateTi AnnotationAssertion(rdfs:label obo:CL_4047035 "stomach smooth muscle outer longitudinal layer cell"@en) SubClassOf(obo:CL_4047035 obo:CL_4047034) +# Class: obo:CL_4047040 (smooth muscle circular layer cell) + +AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:18221249") Annotation(oboInOwl:hasDbXref "PMID:27445346") obo:IAO_0000115 obo:CL_4047040 "A smooth muscle circular layer cell is a specialized cell type found in the inner muscular layer of hollow organs. It is characterized by its spindle shape, single nucleus, lack of striations, involuntary contraction ability, and spiral/helical arrangement around organ lumens. This cell is crucial for peristaltic movements in organs.") +AnnotationAssertion(terms:contributor obo:CL_4047040 ) +AnnotationAssertion(terms:date obo:CL_4047040 "2025-01-06T15:40:21Z"^^xsd:dateTime) +AnnotationAssertion(rdfs:label obo:CL_4047040 "smooth muscle circular layer cell") +SubClassOf(obo:CL_4047040 obo:CL_0008000) + # Class: obo:CL_4047051 (small intestine BEST4+ enterocyte) AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:24223998") Annotation(oboInOwl:hasDbXref "PMID:34497389") obo:IAO_0000115 obo:CL_4047051 "An enterocyte of the human small intestine expressing bestrophin-4 (BEST4) calcium-activated ion channels. These enterocytes have a disinctive transcriptomic profile and are scattered through the small intestine epithelium.") From 6af5b9029de6354bbd6b9e95c64fad2b30e274fb Mon Sep 17 00:00:00 2001 From: JABelfiore Date: Mon, 6 Jan 2025 15:50:41 +0000 Subject: [PATCH 2/2] edited parent term --- src/ontology/cl-edit.owl | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/src/ontology/cl-edit.owl b/src/ontology/cl-edit.owl index d676028dd..6485a7979 100644 --- a/src/ontology/cl-edit.owl +++ b/src/ontology/cl-edit.owl @@ -33104,7 +33104,7 @@ AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:18221249") Annotation(ob AnnotationAssertion(terms:contributor obo:CL_4047040 ) AnnotationAssertion(terms:date obo:CL_4047040 "2025-01-06T15:40:21Z"^^xsd:dateTime) AnnotationAssertion(rdfs:label obo:CL_4047040 "smooth muscle circular layer cell") -SubClassOf(obo:CL_4047040 obo:CL_0008000) +SubClassOf(obo:CL_4047040 obo:CL_0000192) # Class: obo:CL_4047051 (small intestine BEST4+ enterocyte)