Fix class links #24
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| name: CI | |
| on: | |
| push: | |
| branches: [develop, master] | |
| pull_request: | |
| branches: [develop] | |
| jobs: | |
| # Define matrix build for multiple test scenarios | |
| test: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| # py_backwardscompat is not included because there is also an issue with numpy compatibility on Python 3.10 | |
| env_name: [py_pinned_dependencies, py_latest_dependencies] | |
| steps: | |
| - name: Checkout Code | |
| uses: actions/checkout@v3 | |
| with: | |
| lfs: true | |
| - name: Setup Python | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: "3.10" | |
| - name: Install Dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| if [[ "${{ matrix.env_name }}" == "py_pinned_dependencies" ]]; then | |
| pip install -v \ | |
| -r requirements.txt \ | |
| -r requirements_torch.txt \ | |
| -r requirements_lightgbm.txt \ | |
| -r requirements_geoanalytics.txt \ | |
| -r requirements_xgboost.txt \ | |
| pytest \ | |
| pytest-cov \ | |
| pytest-xdist \ | |
| pytorch-lightning~=1.1.0 \ | |
| coverage \ | |
| coverage-badge | |
| elif [[ "${{ matrix.env_name }}" == "py_latest_dependencies" ]]; then | |
| pip install \ | |
| pytest \ | |
| jupyter==1.0.0 \ | |
| nbconvert==6.5.0 \ | |
| clearml==0.17.1 \ | |
| "pytorch-lightning>=1.1" \ | |
| ".[full]" | |
| elif [[ "${{ matrix.env_name }}" == "py_backwardscompat" ]]; then | |
| pip install \ | |
| pytest \ | |
| "scikit-learn==1.0.2" \ | |
| "numpy<1.21" \ | |
| ".[torch]" | |
| fi | |
| pip install --no-deps -e . | |
| - name: Run Tests | |
| run: | | |
| if [[ "${{ matrix.env_name }}" == "py_pinned_dependencies" ]]; then | |
| coverage erase | |
| pytest -n 4 --cov --cov-append --cov-report=term-missing tests; | |
| coverage html | |
| coverage-badge -o badges/coverage.svg -f | |
| elif [[ "${{ matrix.env_name }}" == "py_latest_dependencies" ]]; then | |
| pytest | |
| elif [[ "${{ matrix.env_name }}" == "py_backwardscompat" ]]; then | |
| pytest tests/backwardscompat; | |
| fi | |
| - name: Run Notebook Tests | |
| run: | | |
| if [[ "${{ matrix.env_name }}" == "py_latest_dependencies" ]]; then | |
| pytest notebooks; | |
| fi | |
| # Documentation build job | |
| docs: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout Code | |
| uses: actions/checkout@v3 | |
| - name: Setup Python | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: "3.10" | |
| - name: Install Documentation Dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install \ | |
| sphinx==5.0.2 \ | |
| sphinxcontrib-websupport==1.2.4 \ | |
| sphinx-toolbox==3.7.0 \ | |
| sphinx_rtd_theme \ | |
| nbsphinx \ | |
| ipython \ | |
| ipywidgets \ | |
| jupyter-book==0.15.1 | |
| - name: Build Documentation | |
| run: sh build-docs.sh | |