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Create a table of protein sequence features and coordinates #2202

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ValWood opened this issue Aug 6, 2024 · 3 comments
Open

Create a table of protein sequence features and coordinates #2202

ValWood opened this issue Aug 6, 2024 · 3 comments
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@ValWood
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ValWood commented Aug 6, 2024

Create a table of protein sequence features and coordinates that can be toggled on and off.
Longer term we might make this table exportable, but at least this way people can copy paste

kimrutherford added a commit that referenced this issue Aug 27, 2024
@kimrutherford kimrutherford self-assigned this Aug 28, 2024
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I started implementing this but it looks a bit naff so for now it's only available on dev.pombase.org.

There's now a "Show as table" toggle button here:
https://dev.pombase.org/gene_protein_features/SPAC23C4.18c

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@ValWood
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ValWood commented Aug 28, 2024

I guess the 2 columns are redundant. Should we include evidence and PMID here? Or should we wait for the other panels that we planned? Or could this be adapted for that purpose? Questions, Questions!

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ValWood commented Sep 10, 2024

@Antonialock suggestion
2. when clicking on a "category" (row) in the graphic I'd expect to be presented with a table listing all features of that type for the gene of interest, showing e.g. residues, and source of the information

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