Singularity.1.6-jre8-cuda

Bootstrap: docker
From: ubuntu:bionic

%labels
Maintainer eric.burgueno@plantandfood.co.nz
Version 1.6

%post
  ## Download prerequisites
  apt-get update
  apt-get -y install --no-install-recommends libcommons-math3-java libnvidia-compute-430 ocl-icd-libopencl1 openjdk-8-jdk wget

  ## Install
  cd /opt
  wget http://ufgb966.forst.uni-goettingen.de/GroIMP/GroIMP-1.6-all.deb
  apt-get -y install ./GroIMP-1.6-all.deb
  ln -s /usr/share/java /usr/share/GroIMP/ext

  ## Cleanup
  rm -f GroIMP-1.6-all.deb
  apt-get -y remove wget
  apt-get -y autoremove

%runscript
  exec /usr/bin/groimp "$@"