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File9.kin
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@text
"MIXED TERTIARY STRUCTURE MOTIFS -- THE ALPHA/BETA BARREL (A COMMON MOTIF)"
The alpha/beta barrel consisting of 8 parallel beta-strands surrounded by 8 alpha helices was first observed in a protein called 'triosephosphate isomerase'; hence, this barrel is commonly known as the TIM barrel. The barrel is built up from consecutive beta-strand/alpha-helix/beta-strand units. At one end of the barrel, a chemical reaction takes place in which a sugar is isomerized in a metabolic pathway found in certain bacteria and yeast. The first kinemage shows how the structure of TIM adjusts to accommodate the binding of an enzyme inhibitor (from PDB file, 2YPI). Specifically, a loop moves downward over the inhibitor, much like a lid.
As you will be able to see in kinemage 2, the alpha/beta barrel motif occurs in many different proteins that have different amino acid sequences and support different chemical reactions. The alpha-carbon traces of four of these proteins can be compared by repeatedly clicking on the 'ANIMATE' button to cycle through the structures. The structural similarity between the four proteins should be evident. Aside from TIM, the proteins shown in this kinemage are: 'amylase' (responsible for the catalysis of carbohydrates into sugar in animals; from PDB file, 6TAA); 'flavocytochrome' (which breaks down lactate to produce energy in yeast cells; from PDB file, 1FCB); and 'RuBisCO' (involved in the first step of photosynthesis in plants; from PDB file, 1RUS). These proteins are present in different species and have different functions, yet possess similar structures with the chemical reaction occurring in similar locations. This demonstrates the ability of species to adapt a structure, over the course of evolution, which has proven to be functionally efficient.
@kinemage 1
@caption
Calpha trace of one subunit of TIM, with and without bound inhibitor (purple). The alpha/beta barrel can be highlighted in gold (sheet) & pinktint (helices). Repeatedly click on 'ANIMATE' to examine the conformational changes upon inhibitor binding. View2 gives a good look through the center of the barrel.
@onewidth
@viewid {Side}
@zoom 1.00
@zslab 240
@center 32.883 38.875 12.780
@matrix
0.976521 0.115541 0.181814 0.189529 -0.861981 -0.470179 0.102395 0.493599 -0.863641
@2viewid {Thru barrel}
@2zoom 1.00
@2zslab 240
@2center 32.883 38.875 12.780
@2matrix
0.932292 -0.198777 0.302189 0.341689 0.209922 -0.916069 0.118657 0.957299 0.263628
@group {TIM} animate
@subgroup {Alpha-C's} dominant
@vectorlist {ca-ca} color=cyan
{ca ser a 2}P 28.993 56.675 21.036
{ca ser a 2}28.993 56.675 21.036
{ca lys a 3}29.912 53.647 19.043
{ca pro a 4}29.753 52.321 15.451
{ca gln a 5}27.188 49.798 14.212
{ca pro a 6}27.479 46.648 16.263
{ca ile a 7}27.992 43.113 14.858
{ca ala a 8}26.607 39.883 16.152
{ca ala a 9}28.555 37.067 14.47
{ca ala a 10}27.636 33.35 14.857
{ca asn a 11}30.544 31.169 14.119
{ca trp a 12}28.906 27.717 13.83
{ca lys a 13}32.385 26.16 13.562
{ca cys a 14}32.656 22.636 12.253
{ca asn a 15}29.186 21.592 13.271
{ca gly a 16}25.867 21.101 11.812
{ca ser a 17}23.197 19.222 9.989
{ca gln a 18}20.725 20.217 7.323
{ca gln a 19}17.917 19.468 9.771
{ca ser a 20}19.196 21.361 12.837
{ca leu a 21}20.562 24.393 10.953
{ca ser a 22}17.34 24.773 8.943
{ca glu a 23}15.527 24.941 12.271
{ca leu a 24}17.922 27.495 13.713
{ca ile a 25}17.612 29.517 10.496
{ca asp a 26}13.908 29.496 10.989
{ca leu a 27}14.17 30.745 14.556
{ca phe a 28}16.501 33.545 13.283
{ca asn a 29}14.274 34.731 10.445
{ca ser a 30}11.391 34.934 12.852
{ca thr a 31}13.353 37.189 15.137
{ca ser a 32}12.226 40.783 15.658
{ca ile a 33}15.275 43.047 15.413
{ca asn a 34}14.657 46.757 15.843
{ca his a 35}17.972 48.387 16.169
{ca asp a 36}20.848 48.885 13.795
{ca val a 37}23.011 45.799 14.108
{ca gln a 38}24.634 43.667 11.477
{ca cys a 39}24.093 39.929 12.069
{ca val a 40}26.446 37.468 10.506
{ca val a 41}26.087 33.743 10.051
{ca ala a 42}29.331 31.822 9.421
{ca ser a 43}28.476 28.228 8.348
{ca thr a 44}30.672 25.351 7.106
{ca phe a 45}31.608 25.588 3.382
{ca val a 46}29.222 22.704 2.737
{ca his a 47}26.263 24.43 4.333
{ca leu a 48}26.672 27.757 2.512
{ca ala a 49}24.205 27.026 -0.227
{ca met a 50}21.435 25.973 2.099
{ca thr a 51}22.164 28.957 4.33
{ca lys a 52}21.877 31.605 1.625
{ca glu a 53}18.629 30.156 0.248
{ca arg a 54}16.978 29.978 3.69
{ca leu a 55}18.122 33.106 5.58
{ca ser a 56}15.68 35.779 4.568
{ca his a 57}16.203 38.064 7.53
{ca pro a 58}17.173 41.549 6.341
{ca lys a 59}19.615 42.064 9.12
{ca phe a 60}21.552 38.889 8.419
{ca val a 61}24.405 38.236 5.858
{ca ile a 62}26.393 35.042 5.266
{ca ala a 63}30.019 34.531 5.932
{ca ala a 64}32.568 31.754 5.401
{ca gln a 65}35.002 30.491 8.104
{ca asn a 66}38.167 30.705 6.023
{ca ala a 67}39.734 30.868 2.598
{ca ile a 68}42.937 30.768 0.64
{ca ala a 69}43.764 33.828 -1.442
{ca lys a 70}43.892 32.335 -5.064
{ca ser a 71}42.507 29.404 -6.852
{ca gly a 72}44.763 26.555 -8.086
{ca ala a 73}46.208 23.16 -7.067
{ca phe a 74}45.25 23.212 -3.431
{ca thr a 75}43.236 20.136 -2.803
{ca gly a 76}40.622 20.41 0.019
{ca glu a 77}40.849 24.244 0.124
{ca val a 78}38.44 26.945 -0.87
{ca ser a 79}39.696 30.241 -2.345
{ca leu a 80}38.378 33.838 -2.405
{ca pro a 81}37.368 33.914 -6.045
{ca ile a 82}35.332 30.736 -5.578
{ca leu a 83}33.57 32.513 -2.701
{ca lys a 84}33.097 35.779 -4.637
{ca asp a 85}31.459 34.064 -7.649
{ca phe a 86}29.288 32.283 -5.045
{ca gly a 87}27.838 35.517 -3.669
{ca val a 88}29.671 35.34 -0.334
{ca asn a 89}31.075 38.675 0.839
{ca trp a 90}31.919 38.083 4.555
{ca ile a 91}34.842 36.053 5.911
{ca val a 92}36.354 35.045 9.18
{ca leu a 93}40.058 34.952 9.021
{ca gly a 94}42.835 34.056 11.459
{ca his a 95}40.71 32.382 14.023
{ca ser a 96}42.651 30.895 16.923
{ca glu a 97}41.632 27.367 16.178
{ca arg a 98}43.264 27.87 12.815
{ca arg a 99}46.3 29.633 14.27
{ca ala a 100}46.818 26.599 16.572
{ca tyr a 101}46.016 23.518 14.544
{ca tyr a 102}46.556 24.725 10.954
{ca gly a 103}49.79 26.601 10.745
{ca glu a 104}48.334 30.084 10.51
{ca thr a 105}51.202 32.513 11.489
{ca asn a 106}50.777 36.295 11.788
{ca glu a 107}52.086 36.48 8.271
{ca ile a 108}49.63 33.987 6.602
{ca val a 109}46.78 35.794 8.323
{ca ala a 110}47.883 39.253 7.092
{ca asp a 111}48.179 37.959 3.523
{ca lys a 112}44.723 36.355 3.645
{ca val a 113}43.251 39.45 5.028
{ca ala a 114}44.937 41.764 2.56
{ca ala a 115}43.882 39.339 -0.202
{ca ala a 116}40.236 39.513 0.981
{ca val a 117}40.125 43.273 1.354
{ca ala a 118}41.559 43.566 -2.166
{ca ser a 119}38.798 41.33 -3.63
{ca gly a 120}35.99 43.274 -1.914
{ca phe a 121}35.116 41.106 1.237
{ca met a 122}34.095 42.443 4.708
{ca val a 123}36.666 40.701 6.951
{ca ile a 124}36.406 39.685 10.566
{ca ala a 125}39.996 39.255 11.551
{ca cys a 126}40.716 37.518 14.824
{ca ile a 127}43.65 38.278 17.201
{ca gly a 128}44.291 37.205 20.795
{ca glu a 129}46.889 35.787 23.232
{ca thr a 130}47.287 32.408 24.986
{ca leu a 131}47.488 31.878 28.779
{ca gln a 132}51.214 31.367 28.388
{ca glu a 133}51.837 34.638 26.676
{ca arg a 134}49.417 36.227 29.036
{ca glu a 135}50.965 34.781 32.205
{ca ser a 136}54.398 35.869 31.17
{ca gly a 137}53.383 39.551 30.949
{ca arg a 138}53.203 39.423 27.103
{ca thr a 139}49.634 40.442 26.343
{ca ala a 140}50.563 43.652 24.638
{ca val a 141}53.47 42.528 22.488
{ca val a 142}51.43 39.648 21.081
{ca val a 143}48.183 41.537 20.341
{ca leu a 144}49.902 44.584 18.919
{ca thr a 145}52.139 42.363 16.882
{ca gln a 146}49.094 40.604 15.518
{ca ile a 147}47.372 43.802 14.463
{ca ala a 148}50.587 45.346 13.241
{ca ala a 149}51.241 42.41 10.965
{ca ile a 150}47.804 42.785 9.455
{ca ala a 151}48.22 46.556 9.191
{ca lys a 152}51.424 46.601 7.166
{ca lys a 153}49.458 45.332 4.15
{ca leu a 154}46.568 47.75 4.318
{ca lys a 155}46.035 51.4 3.257
{ca lys a 156}43.986 53.799 5.255
{ca ala a 157}41.013 53.279 2.977
{ca asp a 158}41.122 49.542 3.481
{ca trp a 159}40.108 49.771 7.148
{ca ala a 160}36.514 50.318 6.262
{ca lys a 161}36.497 46.696 5.116
{ca val a 162}37.854 45.442 8.433
{ca val a 163}36.417 44.176 11.679
{ca ile a 164}38.654 42.964 14.596
{ca ala a 165}37.668 40.14 16.987
{ca tyr a 166}39.652 39.902 20.22
{ca glu a 167}39.847 36.241 21.228
{ca pro a 168}40.889 35.66 24.943
{ca val a 169}42.656 32.393 24.192
{ca trp a 170}43.967 32.204 27.696
{ca ala a 171}40.356 31.892 28.832
{ca ile a 172}39.357 29.411 26.282
{ca gly a 173}39.411 25.764 27.558
{ca thr a 174}42.074 26.65 30.231
{ca gly a 175}39.75 26.822 33.241
{ca lys a 176}40.211 30.638 33.735
{ca val a 177}37.41 33.329 33.605
{ca ala a 178}37.53 36.432 31.662
{ca thr a 179}35.717 39.286 33.337
{ca pro a 180}34.214 42.227 31.464
{ca gln a 181}37.007 44.538 32.732
{ca gln a 182}39.745 42.315 31.222
{ca ala a 183}37.929 42.106 27.874
{ca gln a 184}37.521 45.902 27.83
{ca glu a 185}41.238 46.478 28.534
{ca ala a 186}42.335 44.179 25.71
{ca his a 187}39.934 46.112 23.509
{ca ala a 188}41.057 49.589 24.534
{ca leu a 189}44.541 48.591 23.846
{ca ile a 190}43.805 47.572 20.25
{ca arg a 191}41.908 50.779 19.759
{ca ser a 192}44.83 52.835 21.108
{ca trp a 193}47.209 51.21 18.552
{ca val a 194}44.836 51.868 15.721
{ca ser a 195}44.118 55.415 16.838
{ca ser a 196}47.739 56.029 17.207
{ca lys a 197}49.215 54.208 14.134
{ca ile a 198}46.537 54.687 11.421
{ca gly a 199}44.306 57.454 12.706
{ca ala a 200}41.616 58.664 15.134
{ca asp a 201}38.9 58.625 12.54
{ca val a 202}39.527 55.004 11.563
{ca ala a 203}39.759 54.1 15.277
{ca gly a 204}36.299 55.533 16.108
{ca glu a 205}34.655 53.72 13.263
{ca leu a 206}36.487 50.452 13.948
{ca arg a 207}34.485 47.493 15.185
{ca ile a 208}36.197 45.381 17.83
{ca leu a 209}34.153 42.277 18.608
{ca tyr a 210}34.617 40.213 21.809
{ca gly a 211}35.367 36.601 20.738
{ca gly a 212}35.285 34.88 24.103
{ca ser a 213}32.678 33.129 26.142
{ca val a 214}29.34 34.73 25.486
{ca asn a 215}26.031 33.507 26.691
{ca gly a 216}22.586 35.089 26.822
{ca lys a 217}23.153 36.166 30.469
{ca asn a 218}26.485 37.989 30.248
{ca ala a 219}26.253 39.47 26.745
{ca arg a 220}24.658 42.764 27.886
{ca thr a 221}27.244 43.298 30.633
{ca leu a 222}29.937 42.701 27.997
{ca tyr a 223}28.288 45.068 25.57
{ca gln a 224}28.085 47.7 28.253
{ca gln a 225}31.823 48.225 28.066
{ca arg a 226}33.108 51.198 26.113
{ca asp a 227}35.18 49.397 23.49
{ca val a 228}32.938 46.376 22.901
{ca asn a 229}31.297 46.512 19.479
{ca gly a 230}29.46 43.23 19.532
{ca phe a 231}30.578 39.556 19.456
{ca leu a 232}32.018 36.703 17.502
{ca val a 233}30.147 33.649 18.819
{ca gly a 234}30.927 29.897 18.949
{ca gly a 235}28.787 27.673 21.329
{ca ala a 236}25.714 29.858 21.911
{ca ser a 237}25.623 30.57 18.125
{ca leu a 238}24.195 26.961 17.575
{ca lys a 239}21.499 27.73 20.186
{ca pro a 240}18.271 29.779 20.394
{ca glu a 241}20.198 31.861 22.914
{ca phe a 242}22.034 33.539 20.059
{ca val a 243}18.82 35.59 19.958
{ca asp a 244}19.45 37.27 23.328
{ca ile a 245}22.982 37.977 22.158
{ca ile a 246}21.678 39.959 19.168
{ca lys a 247}19.445 41.922 21.527
{ca ala a 248}22.238 42.64 23.958
{ca thr a 249}23.725 45.002 21.291
{ca gln a 250}20.99 47.706 21.69
@subgroup {Barrel} nobutton
@vectorlist {helices} nobutton color=pinktint master= {Barrel} off
{ca gly a 16}P 25.867 21.101 11.812
{ca ser a 17}23.197 19.222 9.989
{ca gln a 18}20.725 20.217 7.323
{ca gln a 19}17.917 19.468 9.771
{ca ser a 20}19.196 21.361 12.837
{ca leu a 21}20.562 24.393 10.953
{ca ser a 22}17.34 24.773 8.943
{ca glu a 23}15.527 24.941 12.271
{ca leu a 24}17.922 27.495 13.713
{ca ile a 25}17.612 29.517 10.496
{ca asp a 26}13.908 29.496 10.989
{ca leu a 27}14.17 30.745 14.556
{ca phe a 28}16.501 33.545 13.283
{ca asn a 29}14.274 34.731 10.445
{ca ser a 30}11.391 34.934 12.852
{ca val a 46}P 29.222 22.704 2.737
{ca his a 47}26.263 24.43 4.333
{ca leu a 48}26.672 27.757 2.512
{ca ala a 49}24.205 27.026 -0.227
{ca met a 50}21.435 25.973 2.099
{ca thr a 51}22.164 28.957 4.33
{ca lys a 52}21.877 31.605 1.625
{ca glu a 53}18.629 30.156 0.248
{ca arg a 54}16.978 29.978 3.69
{ca ser a 79}P 39.696 30.241 -2.345
{ca leu a 80}38.378 33.838 -2.405
{ca pro a 81}37.368 33.914 -6.045
{ca ile a 82}35.332 30.736 -5.578
{ca leu a 83}33.57 32.513 -2.701
{ca lys a 84}33.097 35.779 -4.637
{ca asp a 85}31.459 34.064 -7.649
{ca phe a 86}29.288 32.283 -5.045
{ca gly a 87}27.838 35.517 -3.669
{ca his a 95}P 40.71 32.382 14.023
{ca ser a 96}42.651 30.895 16.923
{ca glu a 97}41.632 27.367 16.178
{ca arg a 98}43.264 27.87 12.815
{ca arg a 99}46.3 29.633 14.27
{ca ala a 100}46.818 26.599 16.572
{ca tyr a 101}46.016 23.518 14.544
{ca tyr a 102}46.556 24.725 10.954
{ca thr a 105}P 51.202 32.513 11.489
{ca asn a 106}50.777 36.295 11.788
{ca glu a 107}52.086 36.48 8.271
{ca ile a 108}49.63 33.987 6.602
{ca val a 109}46.78 35.794 8.323
{ca ala a 110}47.883 39.253 7.092
{ca asp a 111}48.179 37.959 3.523
{ca lys a 112}44.723 36.355 3.645
{ca val a 113}43.251 39.45 5.028
{ca ala a 114}44.937 41.764 2.56
{ca ala a 115}43.882 39.339 -0.202
{ca ala a 116}40.236 39.513 0.981
{ca val a 117}40.125 43.273 1.354
{ca ala a 118}41.559 43.566 -2.166
{ca ser a 119}38.798 41.33 -3.63
{ca gly a 120}35.99 43.274 -1.914
{ca thr a 130}P 47.287 32.408 24.986
{ca leu a 131}47.488 31.878 28.779
{ca gln a 132}51.214 31.367 28.388
{ca glu a 133}51.837 34.638 26.676
{ca arg a 134}49.417 36.227 29.036
{ca glu a 135}50.965 34.781 32.205
{ca ser a 136}54.398 35.869 31.17
{ca gly a 137}53.383 39.551 30.949
{ca arg a 138}53.203 39.423 27.103
{ca thr a 139}49.634 40.442 26.343
{ca ala a 140}50.563 43.652 24.638
{ca val a 141}53.47 42.528 22.488
{ca val a 142}51.43 39.648 21.081
{ca val a 143}48.183 41.537 20.341
{ca leu a 144}49.902 44.584 18.919
{ca thr a 145}52.139 42.363 16.882
{ca gln a 146}49.094 40.604 15.518
{ca ile a 147}47.372 43.802 14.463
{ca ala a 148}50.587 45.346 13.241
{ca ala a 149}51.241 42.41 10.965
{ca ile a 150}47.804 42.785 9.455
{ca ala a 151}48.22 46.556 9.191
{ca lys a 152}51.424 46.601 7.166
{ca lys a 153}49.458 45.332 4.15
{ca leu a 154}46.568 47.75 4.318
{ca val a 177}P 37.41 33.329 33.605
{ca ala a 178}37.53 36.432 31.662
{ca thr a 179}35.717 39.286 33.337
{ca pro a 180}34.214 42.227 31.464
{ca gln a 181}37.007 44.538 32.732
{ca gln a 182}39.745 42.315 31.222
{ca ala a 183}37.929 42.106 27.874
{ca gln a 184}37.521 45.902 27.83
{ca glu a 185}41.238 46.478 28.534
{ca ala a 186}42.335 44.179 25.71
{ca his a 187}39.934 46.112 23.509
{ca ala a 188}41.057 49.589 24.534
{ca leu a 189}44.541 48.591 23.846
{ca ile a 190}43.805 47.572 20.25
{ca arg a 191}41.908 50.779 19.759
{ca ser a 192}44.83 52.835 21.108
{ca trp a 193}47.209 51.21 18.552
{ca val a 194}44.836 51.868 15.721
{ca ser a 195}44.118 55.415 16.838
{ca ser a 196}47.739 56.029 17.207
{ca lys a 197}49.215 54.208 14.134
{ca ile a 198}46.537 54.687 11.421
{ca gly a 199}44.306 57.454 12.706
{ca ala a 200}41.616 58.664 15.134
{ca asp a 201}38.9 58.625 12.54
{ca val a 202}39.527 55.004 11.563
{ca ala a 203}39.759 54.1 15.277
{ca gly a 204}36.299 55.533 16.108
{ca ser a 213}P 32.678 33.129 26.142
{ca val a 214}29.34 34.73 25.486
{ca asn a 215}26.031 33.507 26.691
{ca gly a 216}22.586 35.089 26.822
{ca lys a 217}23.153 36.166 30.469
{ca asn a 218}26.485 37.989 30.248
{ca ala a 219}26.253 39.47 26.745
{ca arg a 220}24.658 42.764 27.886
{ca thr a 221}27.244 43.298 30.633
{ca leu a 232}P 32.018 36.703 17.502
{ca val a 233}30.147 33.649 18.819
{ca gly a 234}30.927 29.897 18.949
{ca gly a 235}28.787 27.673 21.329
{ca ala a 236}25.714 29.858 21.911
{ca ser a 237}25.623 30.57 18.125
{ca lys a 239}P 21.499 27.73 20.186
{ca pro a 240}18.271 29.779 20.394
{ca glu a 241}20.198 31.861 22.914
{ca phe a 242}22.034 33.539 20.059
{ca val a 243}18.82 35.59 19.958
{ca asp a 244}19.45 37.27 23.328
{ca ile a 245}22.982 37.977 22.158
{ca ile a 246}21.678 39.959 19.168
@vectorlist {sheet} nobutton color=gold master= {Barrel} off
{ca gln a 5}P 27.188 49.798 14.212
{ca pro a 6}27.479 46.648 16.263
{ca ile a 7}27.992 43.113 14.858
{ca ala a 8}26.607 39.883 16.152
{ca ala a 9}28.555 37.067 14.47
{ca ala a 10}27.636 33.35 14.857
{ca asn a 11}30.544 31.169 14.119
{ca val a 37}P 23.011 45.799 14.108
{ca gln a 38}24.634 43.667 11.477
{ca cys a 39}24.093 39.929 12.069
{ca val a 40}26.446 37.468 10.506
{ca val a 41}26.087 33.743 10.051
{ca pro a 58}P 17.173 41.549 6.341
{ca lys a 59}19.615 42.064 9.12
{ca phe a 60}21.552 38.889 8.419
{ca val a 61}24.405 38.236 5.858
{ca ile a 62}26.393 35.042 5.266
{ca ala a 63}30.019 34.531 5.932
{ca asn a 89}P 31.075 38.675 0.839
{ca trp a 90}31.919 38.083 4.555
{ca ile a 91}34.842 36.053 5.911
{ca val a 92}36.354 35.045 9.18
{ca leu a 93}40.058 34.952 9.021
{ca met a 122}P 34.095 42.443 4.708
{ca val a 123}36.666 40.701 6.951
{ca ile a 124}36.406 39.685 10.566
{ca ala a 125}39.996 39.255 11.551
{ca cys a 126}40.716 37.518 14.824
{ca ile a 127}43.65 38.278 17.201
{ca trp a 159}P 40.108 49.771 7.148
{ca ala a 160}36.514 50.318 6.262
{ca lys a 161}36.497 46.696 5.116
{ca val a 162}37.854 45.442 8.433
{ca val a 163}36.417 44.176 11.679
{ca ile a 164}38.654 42.964 14.596
{ca ala a 165}37.668 40.14 16.987
{ca glu a 205}P 34.655 53.72 13.263
{ca leu a 206}36.487 50.452 13.948
{ca arg a 207}34.485 47.493 15.185
{ca ile a 208}36.197 45.381 17.83
{ca leu a 209}34.153 42.277 18.608
{ca asp a 227}P 35.18 49.397 23.49
{ca val a 228}32.938 46.376 22.901
{ca asn a 229}31.297 46.512 19.479
{ca gly a 230}29.46 43.23 19.532
{ca phe a 231}30.578 39.556 19.456
@group {TIM+inhib} animate
@subgroup {Alpha-C's} dominant
@vectorlist {ca-ca} color=white
{ca ser b 2}P 27.688 56.987 19.386
{ca ser b 2}27.688 56.987 19.386
{ca lys b 3}29.467 53.661 19.107
{ca pro b 4}29.888 52.149 15.634
{ca gln b 5}27.119 49.728 14.64
{ca pro b 6}27.648 46.542 16.633
{ca ile b 7}28.051 42.989 15.278
{ca ala b 8}26.676 39.601 16.688
{ca ala b 9}28.516 36.936 14.717
{ca ala b 10}27.662 33.316 14.945
{ca asn b 11}30.755 31.187 14.405
{ca trp b 12}29.406 27.661 13.818
{ca lys b 13}32.951 26.417 13.408
{ca cys b 14}32.978 22.769 12.339
{ca asn b 15}29.488 21.782 13.448
{ca gly b 16}25.934 21.001 12.284
{ca ser b 17}23.504 18.968 10.292
{ca gln b 18}21.009 20.065 7.683
{ca gln b 19}18.237 19.488 10.121
{ca ser b 20}19.663 21.34 13.049
{ca leu b 21}20.972 24.318 11.124
{ca ser b 22}17.661 24.746 9.42
{ca glu b 23}15.92 24.96 12.805
{ca leu b 24}18.362 27.652 14.056
{ca ile b 25}17.653 29.458 10.765
{ca asp b 26}13.812 29.308 11.107
{ca leu b 27}14.453 30.645 14.643
{ca phe b 28}16.587 33.521 13.441
{ca asn b 29}14.175 34.327 10.611
{ca ser b 30}11.369 34.623 13.297
{ca thr b 31}13.172 37.048 15.537
{ca ser b 32}12.582 40.746 15.222
{ca ile b 33}15.339 43.188 15.855
{ca asn b 34}14.495 46.777 16.29
{ca his b 35}18.077 48.219 16.645
{ca asp b 36}20.902 48.916 14.204
{ca val b 37}22.921 45.703 14.396
{ca gln b 38}24.612 43.539 11.775
{ca cys b 39}24.245 39.806 12.448
{ca val b 40}26.63 37.354 10.776
{ca val b 41}26.313 33.58 10.318
{ca ala b 42}29.561 31.769 9.589
{ca ser b 43}28.839 28.212 8.593
{ca thr b 44}30.761 25.338 7.133
{ca phe b 45}31.623 25.634 3.383
{ca val b 46}29.364 22.715 2.883
{ca his b 47}26.332 24.449 4.434
{ca leu b 48}26.793 27.819 2.613
{ca ala b 49}24.263 26.72 0.054
{ca met b 50}21.557 25.77 2.496
{ca thr b 51}22.21 28.922 4.524
{ca lys b 52}22.06 31.32 1.653
{ca glu b 53}18.788 29.819 0.355
{ca arg b 54}17.024 29.637 3.688
{ca leu b 55}18.29 32.618 5.773
{ca ser b 56}15.912 35.483 4.852
{ca his b 57}16.273 38.03 7.661
{ca pro b 58}17.426 41.445 6.389
{ca lys b 59}19.78 41.992 9.379
{ca phe b 60}21.803 38.828 8.77
{ca val b 61}24.637 38.106 6.393
{ca ile b 62}26.461 34.861 5.661
{ca ala b 63}30.22 34.339 6.099
{ca ala b 64}32.804 31.741 5.291
{ca gln b 65}35.04 30.444 8.041
{ca asn b 66}38.272 30.71 6.002
{ca ala b 67}39.744 30.653 2.448
{ca ile b 68}42.975 31.039 0.553
{ca ala b 69}43.74 34.008 -1.637
{ca lys b 70}43.935 32.393 -5.081
{ca ser b 71}42.416 29.524 -6.968
{ca gly b 72}44.555 26.653 -8.175
{ca ala b 73}46.095 23.419 -7.14
{ca phe b 74}45.21 23.297 -3.454
{ca thr b 75}43.278 20.047 -2.88
{ca gly b 76}40.762 20.439 -0.028
{ca glu b 77}40.846 24.34 -0.083
{ca val b 78}38.474 27.019 -1.16
{ca ser b 79}39.56 30.388 -2.586
{ca leu b 80}38.34 33.919 -2.345
{ca pro b 81}37.422 33.735 -6.084
{ca ile b 82}35.14 30.803 -5.575
{ca leu b 83}33.467 32.354 -2.52
{ca lys b 84}32.882 35.652 -4.287
{ca asp b 85}31.388 33.778 -7.282
{ca phe b 86}28.982 32.067 -4.84
{ca gly b 87}27.566 35.18 -3.182
{ca val b 88}29.791 35.285 -0.06
{ca asn b 89}31.212 38.732 0.86
{ca trp b 90}32.095 38.198 4.49
{ca ile b 91}34.867 36.001 5.856
{ca val b 92}36.441 35.145 9.264
{ca leu b 93}40.208 34.98 8.993
{ca gly b 94}43.114 34.279 11.339
{ca his b 95}41.027 32.269 13.798
{ca ser b 96}43.196 30.846 16.625
{ca glu b 97}42.138 27.385 15.755
{ca arg b 98}43.818 27.967 12.399
{ca arg b 99}46.935 29.655 13.842
{ca ala b 100}47.288 26.804 16.311
{ca tyr b 101}46.481 23.647 14.272
{ca tyr b 102}47.127 24.449 10.631
{ca gly b 103}50.043 26.732 11.089
{ca glu b 104}48.639 30.191 10.319
{ca thr b 105}51.382 32.683 11.153
{ca asn b 106}50.938 36.434 11.566
{ca glu b 107}52.223 36.823 7.981
{ca ile b 108}49.888 34.232 6.473
{ca val b 109}46.89 35.872 8.133
{ca ala b 110}48.031 39.307 7.018
{ca asp b 111}48.254 38.039 3.474
{ca lys b 112}44.741 36.539 3.616
{ca val b 113}43.276 39.808 4.978
{ca ala b 114}44.929 42.143 2.357
{ca ala b 115}43.722 39.732 -0.347
{ca ala b 116}40.221 39.429 0.969
{ca val b 117}40.088 43.206 1.292
{ca ala b 118}41.264 43.6 -2.31
{ca ser b 119}38.456 41.297 -3.446
{ca gly b 120}35.911 43.42 -1.736
{ca phe b 121}35.068 41.219 1.22
{ca met b 122}34.22 42.457 4.697
{ca val b 123}36.766 40.634 6.924
{ca ile b 124}36.639 39.615 10.561
{ca ala b 125}40.216 39.154 11.597
{ca cys b 126}40.991 37.4 14.869
{ca ile b 127}43.83 38.297 17.186
{ca gly b 128}44.439 37.091 20.81
{ca glu b 129}46.88 35.668 23.276
{ca thr b 130}47.375 32.187 24.698
{ca leu b 131}47.009 31.092 28.366
{ca gln b 132}50.752 30.966 28.418
{ca glu b 133}51.372 34.42 27.05
{ca arg b 134}48.941 35.949 29.431
{ca glu b 135}50.529 34.395 32.526
{ca ser b 136}54.012 35.573 31.236
{ca gly b 137}52.765 39.172 30.959
{ca arg b 138}53.232 39.3 27.188
{ca thr b 139}49.597 40.175 26.411
{ca ala b 140}50.179 43.742 25.198
{ca val b 141}53.077 42.607 22.969
{ca val b 142}51.269 39.622 21.66
{ca val b 143}48.204 41.525 20.485
{ca leu b 144}49.904 44.619 19.079
{ca thr b 145}52.172 42.495 16.959
{ca gln b 146}49.271 40.557 15.697
{ca ile b 147}47.357 43.683 14.698
{ca ala b 148}50.52 45.344 13.402
{ca ala b 149}51.171 42.408 10.987
{ca ile b 150}47.792 43.092 9.41
{ca ala b 151}48.147 46.836 9.411
{ca lys b 152}51.361 46.416 7.374
{ca lys b 153}49.553 45.095 4.325
{ca leu b 154}46.619 47.475 4.566
{ca lys b 155}46.14 50.958 3.308
{ca lys b 156}44.162 53.548 5.154
{ca ala b 157}40.947 53.235 3.157
{ca asp b 158}41.208 49.431 3.404
{ca trp b 159}40.162 49.631 7.129
{ca ala b 160}36.587 50.512 6.255
{ca lys b 161}36.26 46.772 5.375
{ca val b 162}37.974 45.446 8.51
{ca val b 163}36.653 44.09 11.773
{ca ile b 164}38.897 42.906 14.576
{ca ala b 165}37.918 40.199 16.89
{ca tyr b 166}39.539 39.97 20.24
{ca glu b 167}39.492 36.395 21.365
{ca pro b 168}41.653 35.662 24.393
{ca val b 169}42.553 32.008 23.673
{ca trp b 170}42.127 30.845 27.272
{ca ala b 171}38.508 31.962 27.019
{ca ile b 172}37.7 29.847 23.93
{ca gly b 173}35.076 27.208 24.72
{ca thr b 174}36.221 26.796 28.382
{ca gly b 175}33.707 28.792 30.393
{ca lys b 176}36.587 31.086 31.446
{ca val b 177}35.026 34.308 30.122
{ca ala b 178}37.093 37.447 30.283
{ca thr b 179}35.719 39.866 32.796
{ca pro b 180}34.498 43.193 31.603
{ca gln b 181}37.666 44.863 32.877
{ca gln b 182}39.929 42.317 31.056
{ca ala b 183}38.014 42.732 27.811
{ca gln b 184}37.793 46.497 28.014
{ca glu b 185}41.516 46.905 28.742
{ca ala b 186}42.315 44.612 25.799
{ca his b 187}39.893 46.478 23.484
{ca ala b 188}41.175 49.908 24.524
{ca leu b 189}44.76 48.896 23.937
{ca ile b 190}44.116 47.811 20.328
{ca arg b 191}42.218 51. 19.476
{ca ser b 192}44.911 53.286 20.849
{ca trp b 193}47.338 51.597 18.505
{ca val b 194}44.921 52.094 15.579
{ca ser b 195}44.363 55.813 16.38
{ca ser b 196}48.091 56.283 16.867
{ca lys b 197}49.198 54.446 13.69
{ca ile b 198}46.279 54.856 11.271
{ca gly b 199}44.27 57.791 12.516
{ca ala b 200}41.635 58.782 15.077
{ca asp b 201}38.869 58.66 12.528
{ca val b 202}39.578 55.033 11.744
{ca ala b 203}39.794 54.058 15.392
{ca gly b 204}36.41 55.809 15.961
{ca glu b 205}34.739 53.739 13.3
{ca leu b 206}36.511 50.402 13.787
{ca arg b 207}34.596 47.56 15.295
{ca ile b 208}36.434 45.368 17.812
{ca leu b 209}34.539 42.179 18.76
{ca tyr b 210}34.954 40.105 21.812
{ca gly b 211}34.914 36.326 21.774
{ca gly b 212}35.46 33.612 24.32
{ca ser b 213}32.653 31.842 26.146
{ca val b 214}30.118 34.649 25.605
{ca asn b 215}26.577 33.608 26.479
{ca gly b 216}23.063 34.883 26.972
{ca lys b 217}23.749 35.897 30.58
{ca asn b 218}27.287 37.515 30.353
{ca ala b 219}26.823 39.343 27.054
{ca arg b 220}25.082 42.446 28.489
{ca thr b 221}27.804 43.6 30.864
{ca leu b 222}30.442 42.846 28.277
{ca tyr b 223}28.743 45.074 25.812
{ca gln b 224}28.363 47.838 28.338
{ca gln b 225}32.067 48.529 27.931
{ca arg b 226}33.244 51.612 26.052
{ca asp b 227}35.334 49.724 23.54
{ca val b 228}33.257 46.552 23.103
{ca asn b 229}31.342 46.515 19.755
{ca gly b 230}29.861 43.056 19.838
{ca phe b 231}30.774 39.461 19.758
{ca leu b 232}31.91 36.593 17.805
{ca val b 233}30.308 33.447 19.335
{ca gly b 234}31.031 29.738 19.015
{ca gly b 235}29.077 27.385 21.311
{ca ala b 236}26.156 29.611 22.121
{ca ser b 237}25.625 30.257 18.378
{ca leu b 238}24.255 26.621 17.967
{ca lys b 239}21.471 27.437 20.485
{ca pro b 240}18.496 29.823 20.652
{ca glu b 241}20.526 31.651 23.255
{ca phe b 242}22.227 33.428 20.412
{ca val b 243}19.056 35.401 20.227
{ca asp b 244}19.694 36.911 23.64
{ca ile b 245}23.266 37.703 22.684
{ca ile b 246}21.919 39.635 19.672
{ca lys b 247}19.612 41.541 22.068
{ca ala b 248}22.457 42.628 24.336
{ca thr b 249}24.145 44.756 21.617
{ca gln b 250}23.016 48.215 20.559
@subgroup {Barrel} nobutton
@vectorlist {helices} nobutton color=pinktint master= {Barrel} off
{ca gly b 16}P 25.934 21.001 12.284
{ca ser b 17}23.504 18.968 10.292
{ca gln b 18}21.009 20.065 7.683
{ca gln b 19}18.237 19.488 10.121
{ca ser b 20}19.663 21.34 13.049
{ca leu b 21}20.972 24.318 11.124
{ca ser b 22}17.661 24.746 9.42
{ca glu b 23}15.92 24.96 12.805
{ca leu b 24}18.362 27.652 14.056
{ca ile b 25}17.653 29.458 10.765
{ca asp b 26}13.812 29.308 11.107
{ca leu b 27}14.453 30.645 14.643
{ca phe b 28}16.587 33.521 13.441
{ca asn b 29}14.175 34.327 10.611
{ca ser b 30}11.369 34.623 13.297
{ca val b 46}P 29.364 22.715 2.883
{ca his b 47}26.332 24.449 4.434
{ca leu b 48}26.793 27.819 2.613
{ca ala b 49}24.263 26.72 0.054
{ca met b 50}21.557 25.77 2.496
{ca thr b 51}22.21 28.922 4.524
{ca lys b 52}22.06 31.32 1.653
{ca glu b 53}18.788 29.819 0.355
{ca arg b 54}17.024 29.637 3.688
{ca ser b 79}P 39.56 30.388 -2.586
{ca leu b 80}38.34 33.919 -2.345
{ca pro b 81}37.422 33.735 -6.084
{ca ile b 82}35.14 30.803 -5.575
{ca leu b 83}33.467 32.354 -2.52
{ca lys b 84}32.882 35.652 -4.287
{ca asp b 85}31.388 33.778 -7.282
{ca phe b 86}28.982 32.067 -4.84
{ca gly b 87}27.566 35.18 -3.182
{ca his b 95}P 41.027 32.269 13.798
{ca ser b 96}43.196 30.846 16.625
{ca glu b 97}42.138 27.385 15.755
{ca arg b 98}43.818 27.967 12.399
{ca arg b 99}46.935 29.655 13.842
{ca ala b 100}47.288 26.804 16.311
{ca tyr b 101}46.481 23.647 14.272
{ca tyr b 102}47.127 24.449 10.631
{ca thr b 105}P 51.382 32.683 11.153
{ca asn b 106}50.938 36.434 11.566
{ca glu b 107}52.223 36.823 7.981
{ca ile b 108}49.888 34.232 6.473
{ca val b 109}46.89 35.872 8.133
{ca ala b 110}48.031 39.307 7.018
{ca asp b 111}48.254 38.039 3.474
{ca lys b 112}44.741 36.539 3.616
{ca val b 113}43.276 39.808 4.978
{ca ala b 114}44.929 42.143 2.357
{ca ala b 115}43.722 39.732 -0.347
{ca ala b 116}40.221 39.429 0.969
{ca val b 117}40.088 43.206 1.292
{ca ala b 118}41.264 43.6 -2.31
{ca ser b 119}38.456 41.297 -3.446
{ca gly b 120}35.911 43.42 -1.736
{ca thr b 130}P 47.375 32.187 24.698
{ca leu b 131}47.009 31.092 28.366
{ca gln b 132}50.752 30.966 28.418
{ca glu b 133}51.372 34.42 27.05
{ca arg b 134}48.941 35.949 29.431
{ca glu b 135}50.529 34.395 32.526
{ca ser b 136}54.012 35.573 31.236
{ca gly b 137}52.765 39.172 30.959
{ca arg b 138}53.232 39.3 27.188
{ca thr b 139}49.597 40.175 26.411
{ca ala b 140}50.179 43.742 25.198
{ca val b 141}53.077 42.607 22.969
{ca val b 142}51.269 39.622 21.66
{ca val b 143}48.204 41.525 20.485
{ca leu b 144}49.904 44.619 19.079
{ca thr b 145}52.172 42.495 16.959
{ca gln b 146}49.271 40.557 15.697
{ca ile b 147}47.357 43.683 14.698
{ca ala b 148}50.52 45.344 13.402
{ca ala b 149}51.171 42.408 10.987
{ca ile b 150}47.792 43.092 9.41
{ca ala b 151}48.147 46.836 9.411
{ca lys b 152}51.361 46.416 7.374
{ca lys b 153}49.553 45.095 4.325
{ca leu b 154}46.619 47.475 4.566
{ca val b 177}P 35.026 34.308 30.122
{ca ala b 178}37.093 37.447 30.283
{ca thr b 179}35.719 39.866 32.796
{ca pro b 180}34.498 43.193 31.603
{ca gln b 181}37.666 44.863 32.877
{ca gln b 182}39.929 42.317 31.056
{ca ala b 183}38.014 42.732 27.811
{ca gln b 184}37.793 46.497 28.014
{ca glu b 185}41.516 46.905 28.742
{ca ala b 186}42.315 44.612 25.799
{ca his b 187}39.893 46.478 23.484
{ca ala b 188}41.175 49.908 24.524
{ca leu b 189}44.76 48.896 23.937
{ca ile b 190}44.116 47.811 20.328
{ca arg b 191}42.218 51. 19.476
{ca ser b 192}44.911 53.286 20.849
{ca trp b 193}47.338 51.597 18.505
{ca val b 194}44.921 52.094 15.579
{ca ser b 195}44.363 55.813 16.38
{ca ser b 196}48.091 56.283 16.867
{ca lys b 197}P 49.198 54.446 13.69
{ca ile b 198}46.279 54.856 11.271
{ca gly b 199}44.27 57.791 12.516
{ca ala b 200}41.635 58.782 15.077
{ca asp b 201}38.869 58.66 12.528
{ca val b 202}39.578 55.033 11.744
{ca ala b 203}39.794 54.058 15.392
{ca gly b 204}36.41 55.809 15.961
{ca ser b 213}P 32.653 31.842 26.146
{ca val b 214}30.118 34.649 25.605
{ca asn b 215}26.577 33.608 26.479
{ca gly b 216}23.063 34.883 26.972
{ca lys b 217}23.749 35.897 30.58
{ca asn b 218}27.287 37.515 30.353
{ca ala b 219}26.823 39.343 27.054
{ca arg b 220}25.082 42.446 28.489
{ca thr b 221}27.804 43.6 30.864
{ca leu b 232}P 31.91 36.593 17.805
{ca val b 233}30.308 33.447 19.335
{ca gly b 234}31.031 29.738 19.015
{ca gly b 235}29.077 27.385 21.311
{ca ala b 236}26.156 29.611 22.121
{ca ser b 237}25.625 30.257 18.378
{ca lys b 239}P 21.471 27.437 20.485
{ca pro b 240}18.496 29.823 20.652
{ca glu b 241}20.526 31.651 23.255
{ca phe b 242}22.227 33.428 20.412
{ca val b 243}19.056 35.401 20.227
{ca asp b 244}19.694 36.911 23.64
{ca ile b 245}23.266 37.703 22.684
{ca ile b 246}21.919 39.635 19.672
@vectorlist {sheet} nobutton color=gold master= {Barrel} off
{ca gln b 5}P 27.119 49.728 14.64
{ca pro b 6}27.648 46.542 16.633
{ca ile b 7}28.051 42.989 15.278
{ca ala b 8}26.676 39.601 16.688
{ca ala b 9}28.516 36.936 14.717
{ca ala b 10}27.662 33.316 14.945
{ca asn b 11}30.755 31.187 14.405
{ca val b 37}P 22.921 45.703 14.396
{ca gln b 38}24.612 43.539 11.775
{ca cys b 39}24.245 39.806 12.448
{ca val b 40}26.63 37.354 10.776
{ca val b 41}26.313 33.58 10.318
{ca pro b 58}P 17.426 41.445 6.389
{ca lys b 59}19.78 41.992 9.379
{ca phe b 60}21.803 38.828 8.77
{ca val b 61}24.637 38.106 6.393
{ca ile b 62}26.461 34.861 5.661
{ca ala b 63}30.22 34.339 6.099
{ca asn b 89}P 31.212 38.732 0.86
{ca trp b 90}32.095 38.198 4.49
{ca ile b 91}34.867 36.001 5.856
{ca val b 92}36.441 35.145 9.264
{ca leu b 93}40.208 34.98 8.993
{ca met b 122}P 34.22 42.457 4.697
{ca val b 123}36.766 40.634 6.924
{ca ile b 124}36.639 39.615 10.561
{ca ala b 125}40.216 39.154 11.597
{ca cys b 126}40.991 37.4 14.869
{ca ile b 127}43.83 38.297 17.186
{ca trp b 159}P 40.162 49.631 7.129
{ca ala b 160}36.587 50.512 6.255
{ca lys b 161}36.26 46.772 5.375
{ca val b 162}37.974 45.446 8.51
{ca val b 163}36.653 44.09 11.773
{ca ile b 164}38.897 42.906 14.576
{ca ala b 165}37.918 40.199 16.89
{ca glu b 205}P 34.739 53.739 13.3
{ca leu b 206}36.511 50.402 13.787
{ca arg b 207}34.596 47.56 15.295
{ca ile b 208}36.434 45.368 17.812
{ca leu b 209}34.539 42.179 18.76
{ca asp b 227}P 35.334 49.724 23.54
{ca val b 228}33.257 46.552 23.103
{ca asn b 229}31.342 46.515 19.755
{ca gly b 230}29.861 43.056 19.838
{ca phe b 231}30.774 39.461 19.758
@subgroup {Inhibitor} dominant
@vectorlist {inhibitor} color=purple
{o1 g3p b 300}P 34.653 33.1 17.287
{o1 g3p b 300}34.653 33.1 17.287
{o1 g3p b 300}P 34.653 33.1 17.287
{c1 g3p b 300}34.703 31.733 17.693
{c1 g3p b 300}P 34.703 31.733 17.693
{c2 g3p b 300}35.195 31.752 19.12
{c2 g3p b 300}P 35.195 31.752 19.12
{o2 g3p b 300}36.442 31.03 19.268
{c2 g3p b 300}P 35.195 31.752 19.12
{c3 g3p b 300}34.109 31.342 20.115
{c3 g3p b 300}P 34.109 31.342 20.115
{o4p g3p b 300}34.432 30.595 21.301
{o1p g3p b 300}P 32.692 28.757 21.577
{o1p g3p b 300}32.692 28.757 21.577
{o2p g3p b 300}P 33.777 29.824 23.604
{o2p g3p b 300}33.777 29.824 23.604
{o3p g3p b 300}P 32.242 31.248 22.13
{o3p g3p b 300}32.242 31.248 22.13
{o4p g3p b 300}P 34.432 30.595 21.301
{p g3p b 300}33.211 30.039 22.208
{o1p g3p b 300}P 32.692 28.757 21.577
{p g3p b 300}33.211 30.039 22.208
{o2p g3p b 300}P 33.777 29.824 23.604
{p g3p b 300}33.211 30.039 22.208
{o3p g3p b 300}P 32.242 31.248 22.13
{p g3p b 300}33.211 30.039 22.208
@kinemage 2
@caption
Repeatedly click on 'ANIMATE' to compare the alpha/beta barrels of TIM, amylase, flavocytochrome b2, and RuBisCO. Turn on 'rest' to see the remaining portions of the proteins. Select view2 for a look through the barrel.
@onewidth
@viewid {Thru barrel}
@zoom 1.13
@zslab 140
@center 47.493 27.650 19.183
@matrix
0.446568 -0.367801 0.815659 -0.628106 -0.778096 -0.006980 0.637229 -0.509203 -0.578490
@2viewid {Side}
@2zoom 1.13
@2zslab 140
@2center 47.493 27.650 19.183
@2matrix
0.472052 0.667963 0.575319 -0.614192 -0.218965 0.758171 0.632405 -0.711251 0.306895
@group {TIM} animate
@vectorlist {barrel} color=cyan
{tim Lys 2}P 26.27 21.97 16.14
{tim Pro 3} 28.09 22.36 19.41
{tim Gln 4} 29.61 25.45 20.8
{tim Pro 5} 32.07 26.83 18.35
{tim Ile 6} 35.66 27.81 19.46
{tim Ala 7} 37.75 30.48 17.81
{tim Ala 8} 41.43 29.76 18.65
{tim Ala 9} 44.32 32.24 18.19
{tim Asn 10} 47.71 30.7 18.13
{tim Trp 11} 50.2 33.34 18.55
{tim Lys 12} 53.13 30.84 18.32
{tim Cys 13} 56.58 32.16 18.75
{tim Asn 14} 55.74 35.69 18.29
{tim Gly 15} 54.83 38.84 20.05
{tim Ser 16} 55.81 41.98 21.82
{tim Gln 17} 54.42 43.91 24.83
{tim Gln 18} 53.43 46.78 22.55
{tim Ser 19} 51.98 44.76 19.66
{tim Leu 20} 50.14 42.24 21.99
{tim Ser 21} 48.51 45.06 23.84
{tim Glu 22} 47.22 46.67 20.75
{tim Leu 23} 45.44 43.53 19.71
{tim Ile 24} 44.22 42.84 23.11
{tim Asp 25} 42.41 46.21 23.09
{tim Leu 26} 41.01 45.36 19.73
{tim Phe 27} 39.77 41.92 20.82
{tim Asn 28} 38.27 43.45 24.03
{tim Ser 29} 36.44 46.02 21.96
{tim Thr 30} 34.98 43.49 19.67
{tim Ser 31} 31.29 42.88 19.91
{tim Gln 37}P 34.38 30.39 23.08
{tim Cys 38} 37.37 32.52 22.09
{tim Val 39} 40.8 31.44 23.15
{tim Val 40} 44.18 33.22 23.
{tim Ala 41} 47.26 30.97 23.16
{tim Ser 42} 50.3 33.05 23.99
{tim Thr 43} 53.96 32.34 24.72
{tim Phe 44} 54.67 31.41 28.33
{tim Val 45} 56.28 34.75 28.8
{tim His 46} 53.3 36.79 27.9
{tim Leu 47} 50.79 34.88 29.84
{tim Ala 48} 50.89 37.4 32.74
{tim Met 49} 50.04 40.44 30.54
{tim Thr 50} 47.24 38.7 28.48
{tim Lys 51} 46.01 37.26 31.66
{tim Glu 52} 45.47 40.58 33.47
{tim Arg 53} 44.46 42.54 30.35
{tim Leu 54} 41.81 40.53 28.46
{tim Ser 55} 38.63 42.16 29.6
{tim His 56}P 36.32 40.24 27.26
{tim Pro 57} 33.91 37.76 28.76
{tim Lys 58} 33.95 35.57 25.54
{tim Phe 59} 37.65 35.13 25.87
{tim Val 60} 39.96 32.68 27.77
{tim Ile 61} 43.71 32.3 27.8
{tim Ala 62} 45.58 29.18 26.7
{tim Ala 63} 49.3 27.76 27.
{tim Gln 64} 50.91 26.5 23.78
{tim Asn 65} 52.24 23.5 25.6
{tim Ala 66} 53.42 21.94 28.91
{tim Ile 67} 54.86 18.9 30.52
{tim Ala 68} 52.9 16.95 33.18