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MC.10.1.6(S:R346T)+Orf1a:V627F+S:V1264L(16 seqs, 5 places) #2374

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xz-keg opened this issue Jan 19, 2025 · 13 comments
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MC.10.1.6(S:R346T)+Orf1a:V627F+S:V1264L(16 seqs, 5 places) #2374

xz-keg opened this issue Jan 19, 2025 · 13 comments

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@xz-keg
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xz-keg commented Jan 19, 2025

MC.10.1.6+G12832A,G2144T(Orf1a:V627F)+G25352T(S:V1264L)

GISAID query: G25352T, G12832A, G2144T
No. of seqs: 16(Germany 1 Italy 1 USA 14(MN,NY,CT))

original proposal:
MC.10.1+G22599C(S:R346T)

GISAID query: G22599C, G22865T, G28423A,- G4300T, -29541, -17156,-29409,-27847,-13694,-21721
No. of seqs: 18(Italy 1 Germany 1 USA 12(NY,MN) Canada 4(ON))

First: EPI_ISL_19618557, Germany, 2024-11-25
Latest: EPI_ISL_19673487, USA-NY, 2025-1-7

usher

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@FedeGueli
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it seems fast.

@Sinickle
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This looks like it's possibly the fastest lineage in the world at the moment? Should be proposed on the main page I think.

@xz-keg
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xz-keg commented Jan 28, 2025

25, CT

@xz-keg xz-keg changed the title MC.10.1+S:R346T(18 seqs, 5 places) MC.10.1+S:R346T(25 seqs, 6 places) Jan 28, 2025
@FedeGueli
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Please propose it

@FedeGueli FedeGueli added To be proposed Green light for proposal and removed Rapid review needed labels Jan 28, 2025
@FedeGueli
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This looks like it's possibly the fastest lineage in the world at the moment? Should be proposed on the main page I think.

I don't see being the fastest in my chart but it is fast for sure

@Sinickle
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This looks like it's possibly the fastest lineage in the world at the moment? Should be proposed on the main page I think.

I don't see being the fastest in my chart but it is fast for sure

What about MC.10.1* + S:R346T? (Not limiting to this particular branch by using the query in this Issue)

@FedeGueli
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MC.10.1* + 346T

i think pushed up by huge clusters in Ontario

@xz-keg xz-keg changed the title MC.10.1+S:R346T(25 seqs, 6 places) MC.10.1+S:R346T(19 seqs, 6 places) Jan 29, 2025
@xz-keg
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xz-keg commented Jan 29, 2025

add more -s, making it 19.

@FedeGueli
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add more -s, making it 19.

THX

@DailyCovidCases
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I think you should propose it when it reaches 25 seqs

@FedeGueli FedeGueli changed the title MC.10.1+S:R346T(19 seqs, 6 places) MC.10.1+S:R346T(20 seqs, 6 places) Jan 30, 2025
@FedeGueli
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+1 Germany with the new query

@FedeGueli FedeGueli added this to the MC.10.1.6 milestone Jan 31, 2025
@FedeGueli
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Designated MC.10.1.6 via cov-lineages/pango-designation@9a827aa

FedeGueli referenced this issue in cov-lineages/pango-designation Jan 31, 2025
@FedeGueli FedeGueli added designated and removed To be proposed Green light for proposal labels Jan 31, 2025
@xz-keg
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xz-keg commented Jan 31, 2025

Worth tracking the S:V1264L sub-branch, reopen.

@xz-keg xz-keg reopened this Jan 31, 2025
@xz-keg xz-keg changed the title MC.10.1+S:R346T(20 seqs, 6 places) MC.10.1.6(S:R346T)+Orf1a:V627F+S:V1264L(16 seqs, 5 places) Jan 31, 2025
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