Jn.1. + 572I underwent a mini saltation in a Cluster or a Chronic reverting S:S455L back to BA.2.86 and got S:F565L. #2385
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Likely single chronically infected patient?
Likely a chronically infected patient
ORF9b
S:455
S:565
S:572
I have this open in my tabs since some days, finally i decided to propose it : i am not sure if it is from one chronic patient or a little cluster.
The interesting part of it, beyond the saltation, is that it has S:S455L reverted to BA.2.86.
It has also S:F565L that is quite uncommon
JN.1>> Orf1a:I2903M (A8974G) >> Orf1a:W630C (G2155T) > ORF1b:H2010Y(C19495T), S:T572I(C23277T) > ORF1a:N267Y(1064T), ORF1a:P4120L (C12624T), C15183T, ORF1b:G2337S (G20476A), REV S:S455L (C22926T REV), S:F565L (T23257A), A26492T, C27513T, C27920T, ORF8:V117L (G28242C), ORF9b:L64P (T28474C)
Query:A1064T, C15183T, T23257A
Samples: 4
Places: Wales
Tree:
<img width="1154" alt="Image" src="https://github.com/user-attachments/assets/f2412bd0-0c00-4e65-bddd-55d675842747"
https://nextstrain.org/fetch/genome-test.gi.ucsc.edu/trash/hgPhyloPlace/subtreeAuspice1_genome_test_3ec326_429ca0.json?c=userOrOld
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