v3.18.2

3.18.2 (2022-10-13)

Bug Fixes

• correctly filter target regions (#166) (29f64fc)

v3.18.1

3.18.1 (2022-09-28)

Bug Fixes

• render group labels in oncoprint gene views as heatmaps (6041058)

v3.18.0

3.18.0 (2022-09-28)

Features

• update to datavzrd 2.2 (b1c7963)

v3.17.1

3.17.1 (2022-09-27)

Bug Fixes

• use latest bcftools concat wrapper which fixes a regression that caused it to just pass on the first given bcf. This was leading to missing a lot of calls! Make sure to rerun with the following: -R merge_calls gather_annotated_calls gather_benchmark_calls bcftools_concat gather_calls if those rules were executed with release 3.16 or 3.17. (56be4e1)

v3.17.0

3.17.0 (2022-09-23)

Features

• allow multiple target_regions BED files defined in config.yaml, merging them into one (#161) (84064ef)
• more informative file names (#148) (4b99df9)

v3.16.0

3.16.0 (2022-09-01)

Features

• add group annotation capabilities and corresponding display thereof in oncoprint views (#158) (c8aa3f5)

Bug Fixes

• update conda envs and wrappers (if necessary) to work properly with strict priorities (#159) (a5d7be3)

v3.15.0

3.15.0 (2022-08-05)

Features

• enhance oncoprint report (#156) (c8357fe)

v3.14.1

3.14.1 (2022-07-25)

Bug Fixes

• datavzrd related issues (#152) (dfed4e0)

v3.14.0

3.14.0 (2022-05-20)

Features

• Hide columns in datavzrd report (#151) (7db7b35)
• Remove plotdata from datavzrd template (#149) (7d184ff)

Bug Fixes

• automatically calculate genomic sites covered for tumor mutational burden calculation (#130) (7a26dcc)

v3.13.1

3.13.1 (2022-05-12)

Bug Fixes

• adjust input (#146) (a70a34b)