macs2 not available

[drighelli]

Hi,

I'm using signac to analyze multiple 10x multiome samples, but I have some problems with macs2 on the server.

Is there a way to use signac without macs2 calling peaks?

Thanks!

[timoast]

You don't need to use macs2, you can use any method to get a peak set. An example of another approach is shown in the merge vignette: https://stuartlab.org/signac/articles/merging

[drighelli]

thanks!