Can we adjust the clustering resolution similarly to scRNAseq?

[coopershawna]

My current run separates spatially into 3 groups and 5 clusters. It is pretty apparent that one of my clusters should really be at least 2 based on marker genes. In Seurat (RNAseq), it is pretty easy to just change the resolution and increase the clusters. How do I do this in Signac for ATAC clusters?

Is that part of the "algorithm = 3" from the human pbmc vignette?

Thank you!

[timoast]

The same function is used in Signac/Seurat for clustering (FindClusters()), so you can use the same parameters to adjust the clustering resolution (resolution parameter).

[coopershawna]

Fantastic! Thank you.