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54 Open 21 Closed
54 Open 21 Closed
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Issues list

MCScanX No Matches: Gene ID Mismatch in A. thaliana FASTA & GFF?
#83 opened Feb 27, 2025 by Fantacooke2
Different results before and after Dec 2024 update
#82 opened Feb 14, 2025 by teralevin
1
Installation issue on MacOS
#80 opened Dec 29, 2024 by goeckeritz
Blast database
#76 opened Aug 5, 2024 by Artifice120
1
Warning during the installation and not gining out the results
#75 opened Jun 20, 2024 by Shiva-brahmam03
Issues during installation
#74 opened Apr 8, 2024 by AlbertoBernacchi
1
Blast+ blastn, No data in output file
#72 opened Jan 2, 2024 by Rktf
1
ask help for draw collinearity only one chromsomoe use mcscanx
#71 opened Dec 26, 2023 by Jiangjiangzhang6
Is it possible to generate collinearity file from 1 to 1 orthology tables?
#69 opened Sep 21, 2023 by sheinasim-USDA
Low number of collinear genes
#68 opened Jul 27, 2023 by DustinSokolowski
1
using java
#66 opened Jun 14, 2023 by YingyingZ9
Question
#65 opened Feb 14, 2023 by AndyLy2Zy
2
where can I find gtf_to_mcs.pl script
#64 opened Feb 3, 2023 by LandiMi2
Reading gff error: For input string: "2147774468"
#63 opened Dec 9, 2022 by limengchen628
2
Interpretation of Tandem files
#62 opened Nov 25, 2022 by fafuyyk
1
Does MCScanX support multi-threading?
#61 opened Nov 21, 2022 by sunjiahe-hub
Versioned release package for MCScanX
#60 opened Nov 2, 2022 by jayramr
5
Format of xyz.homology?
#59 opened Oct 25, 2022 by scottcain
3
detect_collinearity_within_gene_families.pl
#58 opened Sep 30, 2022 by Lighter-k
Website not charging to download
#57 opened Sep 15, 2022 by mpalmada
1
Circle_plotter prints half circle with higher number of chromosomes
#54 opened Jul 14, 2022 by jgnunes
1
No result after run commands
#53 opened May 27, 2022 by pcampiteli
9
cannot open cds file
#52 opened May 25, 2022 by ABDULLAHGUJJAR
The problem with drawing with the JAVA MCscanX
#51 opened May 10, 2022 by Wenwen012345
2
Docker container and working example data
#50 opened May 2, 2022 by chriswyatt1
ProTip! Exclude everything labeled bug with -label:bug.