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notebooks

Jupyter notebook examples

The Jupyter notebook examples in this folder are used to test the functions and modules in the package with visualizations. List of current examples:

  • [augmentation] visualizes the effects of several data augmentation techniques.
  • [blending] visualizes the overlapping patterns of different blending functions in sliding-window inference.
  • [seg2affinity] shows how the affinity map is generated from the ground-truth segmentation map.
  • [seg2distance] visualizes the distance transform map of the neuron segmentation masks.