{AH} update to 1.2 - add --random-seed argument

AndreasHeger · Feb 27, 2017 · 640c1f5 · 640c1f5
1 parent c37259b
commit 640c1f5
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Showing 7 changed files with 205 additions and 177 deletions.
diff --git a/pyradar/pyradar.h b/pyradar/pyradar.h
@@ -5,5 +5,10 @@
  * 
  * */
 
-int radar_run_from_files( const char * seq, const char * mali, const char * lfasta1, const char * lfasta2 );
-void radar_setLogLevel( int f);
+int radar_run_from_files(const char * seq,
+			 const char * mali,
+			 const char * lfasta1,
+			 const char * lfasta2,
+			 int random_seed);
+
+void radar_setLogLevel(int f);
diff --git a/pyradar/pyradar.pyx b/pyradar/pyradar.pyx
@@ -3,11 +3,15 @@ Pyrex extension classes used by 'radar.py'.
 """
 
 cdef extern from "pyradar.h":
-	int radar_run_from_files( char *, char *, char *, char * )
-	void radar_setLogLevel( int )
+	int radar_run_from_files(char *, char *, char *, char *, unsigned int)
+	void radar_setLogLevel(int)
 
-def run_from_files( filename_sequence, filename_mali, filename_lfasta, filename_lfasta2 ):
-	return radar_run_from_files( filename_sequence, filename_mali, filename_lfasta, filename_lfasta2 )
+def run_from_files(filename_sequence, filename_mali,
+                   filename_lfasta, filename_lfasta2,
+                   random_seed):
+	return radar_run_from_files(filename_sequence, filename_mali,
+                                    filename_lfasta, filename_lfasta2,
+                                    random_seed)
 
 def setLogLevel(v):
 	"""set the logging level."""