Skip to content

Issues: Arkadiy-Garber/FeGenie

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

27 Open 14 Closed
27 Open 14 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

No protein sequence for Cyc2
#47 opened Jun 21, 2024 by EvaP29
2
running programm with reference database for blast searches throws error
#46 opened Jun 18, 2024 by ckeuschn
2
'Namespace' object has no attribute 'hbm'
#44 opened Jan 3, 2024 by Sxxnwei
1
where was the data for protein DmkA obtained from？
#43 opened Mar 14, 2023 by xdli009
1
Use of ORFs
#42 opened Dec 15, 2022 by STabuteau
2
About iron-sulfur proteins
#41 opened Nov 2, 2022 by maocheng2020
1
error depth = open("%s/%s.depth" % (outDirectory, cell)) | HELP PLS.
#40 opened Oct 16, 2022 by DrRumble
1
Renamed contigs?
#39 opened Sep 22, 2022 by JBuongio
4
geneSummary file
#38 opened Jun 30, 2022 by JBuongio
3
Rewrite using a workflow manager (snakemake, nextflow)
#37 opened Apr 23, 2022 by phiweger
Permission denied when moving files
#36 opened Mar 24, 2022 by aidanfoo96
6
false negatives?
#35 opened Feb 23, 2022 by metalichen
3
Error in hclust(d = dist(x = fegenie.scaled))
#34 opened Dec 7, 2021 by manik-123
1
Heatmap has same values regardless of what inflation factor I use
#33 opened Nov 30, 2021 by patrickmon38
2
Error - ValueError: could not convert string to float: 'EMPTY'
#32 opened Nov 19, 2021 by JBuongio
38
Why the FeGenie installed by conda and the FeGenie installed manually work very differently？
#31 opened Oct 19, 2021 by xdli009
8
DIAMOND Verification: local variable 'idxDict' referenced before assignment
#30 opened Sep 30, 2021 by mwittep
5
Error "hmmsearch: not found ... local variable 'hmmout' referenced before assignment" while running FeGenie
#29 opened Jun 14, 2021 by anapopov
5
Regarding --all_results option
#27 opened Apr 21, 2021 by ShailNair
2
Tagged release and license file
#25 opened Apr 20, 2021 by npavlovikj
17
relative abundace?
#22 opened Mar 17, 2021 by plant272
1
Error when cluster ORFs
#20 opened Sep 29, 2020 by Rachael-16
1
Where to hmms/iron
#15 opened Jul 31, 2020 by bkemish
1
ValueError: invalid literal for int() with base 10: 'protein'
#13 opened Jun 4, 2020 by pdalcinmartins
3
FileNotFoundError on "Easy Installation (if you don't have Conda)"
#12 opened May 28, 2020 by diegusleik
1
ProTip! Find all open issues with in progress development work with linked:pr.