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Arts-of-coding/README.md
  • 👋 Hi, I’m @Arts-of-coding.
  • 👀 I’m interested in Bioinformatics and I am proficient in Python, Snakemake and R.
  • 🌱 I’m currently setting up CI/CD workflows to enable the development of stable software packages.
  • 💞️ If you are looking to collaborate on integrating single-cell datasets or if you want to collaborate on multiomics projects feel free to contact me.
  • 📫 How to reach me: [email protected]

Pinned Loading

  1. cPredictor cPredictor Public

    This repository defines a command-line tool predictor (cPredictor) based on single-cell RNA sequencing data.

    Python 2

  2. AnanseScanpy AnanseScanpy Public

    Implementation of scANANSE for Scanpy objects in Python

    Jupyter Notebook 7 1

  3. siebrenf/opticlust siebrenf/opticlust Public

    Python 1 1

  4. dash_plotly_QC_scRNA dash_plotly_QC_scRNA Public

    Dash app to visualize scRNA-seq data quality control metrics from scanpy objects

    Python

  5. vanheeringen-lab/ANANSE vanheeringen-lab/ANANSE Public

    Prediction of key transcription factors in cell fate determination using enhancer networks. See full ANANSE documentation for detailed installation instructions and usage examples.

    Python 81 16

  6. GHA_docker_image GHA_docker_image Public

    github actions docker image for repos

    Dockerfile