snakemakelib

Snakemake library for all kinds of tasks, with a focus on bioinformatics and next-generation sequencing. See the wiki for more information.

Name	Name	Last commit message	Last commit date
Latest commit percyfal Merge branch 'feature/readgroup' into develop Mar 17, 2015 cbfdf2f · Mar 17, 2015 History 170 Commits
data	data	Update interval_list LN field	Feb 18, 2015
rules	rules	* rules/bio/ngs/settings.rules: change platform to sample_organizatio…	Mar 17, 2015
scripts	scripts	- Add rules and workflows	Nov 1, 2014
snakemakelib	snakemakelib	* rules/bio/ngs/settings.rules: change platform to sample_organizatio…	Mar 17, 2015
test	test	* rules/bio/ngs/settings.rules: change platform to sample_organizatio…	Mar 17, 2015
wiki	wiki	* wiki: Update	Feb 19, 2015
workflows/bio	workflows/bio	* rules/bio/ngs/qc/picard.rules: symlink merge files if len(inputs) == 1	Mar 17, 2015
.gitignore	.gitignore	* .gitignore: ignore data	Mar 4, 2015
LICENSE	LICENSE	Initial commit	Nov 1, 2014
Readme.md	Readme.md	* Readme.md: Update	Nov 11, 2014
setup.cfg	setup.cfg	Initial commit	Nov 1, 2014
setup.py	setup.py	Copied much code from ratatosk library	Nov 14, 2014

Provide feedback