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@BMKEG

Biomedical Knowledge Engineering Group

Older legacy organization for Knowledge Engineering work by Gully Burns at the Information Sciences Institute (USC). See @GullyBurns

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  1. lapdftextProject lapdftextProject Public

    High-level build project for all LAPDF-Text submodules

    103 26

  2. lapdftext lapdftext Public

    Forked from GullyAPCBurns/lapdftext

    LA-PDFText is a system for extracting accurate text from PDF-based research articles (and an interface to be able to improve performance where needed). The system is open-source and provides a simp…

    Java 82 44

  3. sciKnowMineProject sciKnowMineProject Public

    All libraries and components relevant to the SciKnowMine triage application.

    ActionScript 6 5

  4. amr-ld amr-ld Public

    A Python library for mapping AMRs to linked data formats (such as RDF and JSON-LD). This work is heavily derived from Naomi Saphra's 'AMRICA' library (https://github.com/nsaphra/AMRICA) and SMATCH

    Python 4

  5. lapdftextServer lapdftextServer Public

    A web application resource (*.war) file for the digital library client.

    JavaScript 3 6

  6. sciKnowMine sciKnowMine Public

    This is the codebase for the SciKnowMine web application. This codebase generates a *.war file that can be deployed in a tomcat server or run from the command line using Maven's implementation of t…

    JavaScript 2 2

Repositories

Showing 10 of 85 repositories
  • sciDT Public Forked from edvisees/sciDT

    LSTM based sequence labeling model for scientific discourse tagging. This work was created by Pradeep Dasigi @ CMU

    BMKEG/sciDT’s past year of commit activity
    Jupyter Notebook 2 Apache-2.0 5 0 0 Updated Jan 17, 2019
  • sciDT-pipeline Public

    UimaBioC-based pipelines to drive sciDT analysis.

    BMKEG/sciDT-pipeline’s past year of commit activity
    Java 0 Apache-2.0 1 0 0 Updated Sep 14, 2018
  • bmkeg-parent Public Forked from GullyAPCBurns/bmkeg-parent

    This is where we manage maven dependencies, versions and repositories for all our development projects. This serves as the parent for all subsequent work.

    BMKEG/bmkeg-parent’s past year of commit activity
    0 26 0 1 Updated Jun 30, 2018
  • vpdmfGenerator Public

    Offshoot of vpdmfCore, extracting all code generation capabilities to provide better delineated system.

    BMKEG/vpdmfGenerator’s past year of commit activity
    Java 0 1 1 0 Updated Jun 30, 2018
  • vpdmfCore Public

    The core components of the VPDMf system including tools to build and manage linked systems in MySQL, Java and Flex.

    BMKEG/vpdmfCore’s past year of commit activity
    Java 0 0 1 0 Updated Jun 30, 2018
  • uml Public Forked from GullyAPCBurns/uml

    This library manages all low-level interactions with our UML-based metamodel for the data schema of any given system. This includes systems to read various types of UML and other systems to auto-generate code for various languages (currently mainly java and actionscript)

    BMKEG/uml’s past year of commit activity
    Java 0 2 0 0 Updated Jun 30, 2018
  • deepDIG Public

    Implementations of the Domain Insight Graph (DIG, http://dig.isi.edu) formalism applied to advanced, complex scientific subjects (systems level neuroscience, systems biology, etc.).

    BMKEG/deepDIG’s past year of commit activity
    1 3 0 0 Updated Jun 27, 2018
  • erudite-sw Public

    Semantic Web Constructs for ERuDIte

    BMKEG/erudite-sw’s past year of commit activity
    0 2 0 0 Updated Jun 22, 2018
  • bioscholar Public

    The BioScholar web application.

    BMKEG/bioscholar’s past year of commit activity
    JavaScript 0 Apache-2.0 1 0 0 Updated May 9, 2018
  • digitalLibraryDao Public

    The VPDMf-driven library for all functionality pertaining to literature citations and documents.

    BMKEG/digitalLibraryDao’s past year of commit activity
    Java 0 0 1 0 Updated May 4, 2018
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