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v2.3.4
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@ch4rr0 ch4rr0 released this 29 Dec 17:28
· 611 commits to master since this release
v2.3.4
cdf70d7
  • Fixed major issue causing corrupt SAM output when using many threads (-p/--threads) on certain systems.
  • Fixed an issue whereby bowtie2 processes could overwrite each others' named pipes on HPC systems.
  • Fixed an issue causing bowtie2-build and bowtie2-inspect to return prematurely on Windows.
  • Fixed issues raised by compiler "sanitizers" that could potentially have caused memory corruption or undefined behavior.
  • Added the "continuous FASTA" input format (-F) for aligning all the k-mers in the sequences of a FASTA file. Useful for determining mapability of regions of the genome, and similar tasks.
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