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Update ncbi-dataset-cli and add zip/unzip (#574)
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* Fix locale issue

* ncbi-dataset-unlock

* Update Dockerfile

* Update Dockerfile
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mboudet authored Jul 4, 2024
1 parent 5c369bd commit 0a6b103
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31 changes: 31 additions & 0 deletions ncbi-datasets-cli/16.22.1/Dockerfile
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################## BASE IMAGE ######################

FROM condaforge/mambaforge:24.3.0-0

################## METADATA ######################

LABEL base_image="mambaforge"
LABEL version="24.3.0-0"
LABEL about.summary="NCBI Datasets is a new resource that lets you easily gather data from across NCBI databases."
LABEL software="ncbi-datasets-cli"
LABEL software.version="16.22.1"
LABEL about.tags="Genomics"
LABEL about.home="https://www.ncbi.nlm.nih.gov/datasets"
LABEL about.software="https://www.ncbi.nlm.nih.gov/datasets"
LABEL about.documentation="https://www.ncbi.nlm.nih.gov/datasets/docs/"
LABEL about.license="Custom License"
LABEL about.license_file="https://github.com/ncbi/datasets/blob/master/LICENSE.md"
LABEL about.author="NCBI"
LABEL extra.identifiers.biotools="ncbi_datasets"

################## MAINTAINER ######################
MAINTAINER Mateo Boudet <[email protected]>

RUN apt update && \
apt install -y zip && \
apt autoremove -y && \
apt clean && \
rm -rf /var/lib/apt/lists/* /var/log/dpkg.log


RUN conda install -c conda-forge ncbi-datasets-cli=16.22.1

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