(merge): merge main

CAREamics · Jun 26, 2024 · 14e1a3a · 14e1a3a
2 parents dd08e56 + 2764100
commit 14e1a3a
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Showing 34 changed files with 10,119 additions and 143 deletions.
diff --git a/.gitignore b/.gitignore
@@ -6,3 +6,4 @@
 .coverage
 coverage.xml
 lightning_logs
+.mypy_cache
diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml
@@ -17,6 +17,7 @@ repos:
     rev: v0.4.7
     hooks:
       - id: ruff
+        exclude: "^src/careamics/lvae_training/.*|^src/careamics/models/lvae/.*"
         args: [--fix, --target-version, py38]
 
   - repo: https://github.com/psf/black
@@ -29,6 +30,7 @@ repos:
     hooks:
       - id: mypy
         files: "^src/"
+        exclude: "^src/careamics/lvae_training/.*|^src/careamics/models/lvae/.*"
         additional_dependencies:
           - numpy
           - types-PyYAML
@@ -39,6 +41,7 @@ repos:
     rev: v1.7.0
     hooks:
       - id: numpydoc-validation
+        exclude: "^src/careamics/lvae_training/.*|^src/careamics/models/lvae/.*"      
 
   # # jupyter linting and formatting
   # - repo: https://github.com/nbQA-dev/nbQA