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[Internal] [Bug] Conflicts running TOSTADAS on AWS #235

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jessicarowell opened this issue Dec 18, 2024 · 0 comments
Open

[Internal] [Bug] Conflicts running TOSTADAS on AWS #235

jessicarowell opened this issue Dec 18, 2024 · 0 comments
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@jessicarowell
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Description.
TOSTADAS test commands run in Sagemaker but not on EC2

Run environment (container, cloud service, HPC, platform, etc.)
AWS EC2 instance

Command to replicate the error:

Any Additional Context or Information?
Singularity 3+ might not be supported on EC2 (with Amazon Linux base image) because of a Go conflict

Also getting some issues with modules - nameparser and repeatmasker.

Had issues with conda and docker profiles as well.

Will add documentation once I've started testing.

@jessicarowell jessicarowell added the bug Something isn't working label Dec 18, 2024
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