-
Notifications
You must be signed in to change notification settings - Fork 1
Commit
This commit does not belong to any branch on this repository, and may belong to a fork outside of the repository.
add water_conservation_test artifact
- Loading branch information
1 parent
ae93eb1
commit d11a6cb
Showing
7 changed files
with
471 additions
and
0 deletions.
There are no files selected for viewing
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,305 @@ | ||
# This file is machine-generated - editing it directly is not advised | ||
|
||
julia_version = "1.11.2" | ||
manifest_format = "2.0" | ||
project_hash = "74753091693fecdd4a33be59e19da0ff479810d2" | ||
|
||
[[deps.ArgTools]] | ||
uuid = "0dad84c5-d112-42e6-8d28-ef12dabb789f" | ||
version = "1.1.2" | ||
|
||
[[deps.ArtifactUtils]] | ||
deps = ["Downloads", "Git", "HTTP", "Pkg", "ProgressLogging", "SHA", "TOML", "gh_cli_jll"] | ||
git-tree-sha1 = "f7c3ca6c70ea6b035effe5428eb05231ba890c2d" | ||
uuid = "8b73e784-e7d8-4ea5-973d-377fed4e3bce" | ||
version = "0.2.4" | ||
|
||
[[deps.Artifacts]] | ||
uuid = "56f22d72-fd6d-98f1-02f0-08ddc0907c33" | ||
version = "1.11.0" | ||
|
||
[[deps.Base64]] | ||
uuid = "2a0f44e3-6c83-55bd-87e4-b1978d98bd5f" | ||
version = "1.11.0" | ||
|
||
[[deps.BitFlags]] | ||
git-tree-sha1 = "0691e34b3bb8be9307330f88d1a3c3f25466c24d" | ||
uuid = "d1d4a3ce-64b1-5f1a-9ba4-7e7e69966f35" | ||
version = "0.1.9" | ||
|
||
[[deps.ClimaArtifactsHelper]] | ||
deps = ["ArtifactUtils", "Downloads", "Pkg", "REPL", "SHA"] | ||
path = "../ClimaArtifactsHelper.jl" | ||
uuid = "6ffa2572-8378-4377-82eb-ea11db28b255" | ||
version = "0.0.1" | ||
|
||
[[deps.CodecZlib]] | ||
deps = ["TranscodingStreams", "Zlib_jll"] | ||
git-tree-sha1 = "bce6804e5e6044c6daab27bb533d1295e4a2e759" | ||
uuid = "944b1d66-785c-5afd-91f1-9de20f533193" | ||
version = "0.7.6" | ||
|
||
[[deps.ConcurrentUtilities]] | ||
deps = ["Serialization", "Sockets"] | ||
git-tree-sha1 = "ea32b83ca4fefa1768dc84e504cc0a94fb1ab8d1" | ||
uuid = "f0e56b4a-5159-44fe-b623-3e5288b988bb" | ||
version = "2.4.2" | ||
|
||
[[deps.Dates]] | ||
deps = ["Printf"] | ||
uuid = "ade2ca70-3891-5945-98fb-dc099432e06a" | ||
version = "1.11.0" | ||
|
||
[[deps.Downloads]] | ||
deps = ["ArgTools", "FileWatching", "LibCURL", "NetworkOptions"] | ||
uuid = "f43a241f-c20a-4ad4-852c-f6b1247861c6" | ||
version = "1.6.0" | ||
|
||
[[deps.ExceptionUnwrapping]] | ||
deps = ["Test"] | ||
git-tree-sha1 = "d36f682e590a83d63d1c7dbd287573764682d12a" | ||
uuid = "460bff9d-24e4-43bc-9d9f-a8973cb893f4" | ||
version = "0.1.11" | ||
|
||
[[deps.Expat_jll]] | ||
deps = ["Artifacts", "JLLWrappers", "Libdl"] | ||
git-tree-sha1 = "e51db81749b0777b2147fbe7b783ee79045b8e99" | ||
uuid = "2e619515-83b5-522b-bb60-26c02a35a201" | ||
version = "2.6.4+1" | ||
|
||
[[deps.FileWatching]] | ||
uuid = "7b1f6079-737a-58dc-b8bc-7a2ca5c1b5ee" | ||
version = "1.11.0" | ||
|
||
[[deps.Git]] | ||
deps = ["Git_jll"] | ||
git-tree-sha1 = "04eff47b1354d702c3a85e8ab23d539bb7d5957e" | ||
uuid = "d7ba0133-e1db-5d97-8f8c-041e4b3a1eb2" | ||
version = "1.3.1" | ||
|
||
[[deps.Git_jll]] | ||
deps = ["Artifacts", "Expat_jll", "JLLWrappers", "LibCURL_jll", "Libdl", "Libiconv_jll", "OpenSSL_jll", "PCRE2_jll", "Zlib_jll"] | ||
git-tree-sha1 = "399f4a308c804b446ae4c91eeafadb2fe2c54ff9" | ||
uuid = "f8c6e375-362e-5223-8a59-34ff63f689eb" | ||
version = "2.47.1+0" | ||
|
||
[[deps.HTTP]] | ||
deps = ["Base64", "CodecZlib", "ConcurrentUtilities", "Dates", "ExceptionUnwrapping", "Logging", "LoggingExtras", "MbedTLS", "NetworkOptions", "OpenSSL", "PrecompileTools", "Random", "SimpleBufferStream", "Sockets", "URIs", "UUIDs"] | ||
git-tree-sha1 = "6c22309e9a356ac1ebc5c8a217045f9bae6f8d9a" | ||
uuid = "cd3eb016-35fb-5094-929b-558a96fad6f3" | ||
version = "1.10.13" | ||
|
||
[[deps.InteractiveUtils]] | ||
deps = ["Markdown"] | ||
uuid = "b77e0a4c-d291-57a0-90e8-8db25a27a240" | ||
version = "1.11.0" | ||
|
||
[[deps.JLLWrappers]] | ||
deps = ["Artifacts", "Preferences"] | ||
git-tree-sha1 = "be3dc50a92e5a386872a493a10050136d4703f9b" | ||
uuid = "692b3bcd-3c85-4b1f-b108-f13ce0eb3210" | ||
version = "1.6.1" | ||
|
||
[[deps.LibCURL]] | ||
deps = ["LibCURL_jll", "MozillaCACerts_jll"] | ||
uuid = "b27032c2-a3e7-50c8-80cd-2d36dbcbfd21" | ||
version = "0.6.4" | ||
|
||
[[deps.LibCURL_jll]] | ||
deps = ["Artifacts", "LibSSH2_jll", "Libdl", "MbedTLS_jll", "Zlib_jll", "nghttp2_jll"] | ||
uuid = "deac9b47-8bc7-5906-a0fe-35ac56dc84c0" | ||
version = "8.6.0+0" | ||
|
||
[[deps.LibGit2]] | ||
deps = ["Base64", "LibGit2_jll", "NetworkOptions", "Printf", "SHA"] | ||
uuid = "76f85450-5226-5b5a-8eaa-529ad045b433" | ||
version = "1.11.0" | ||
|
||
[[deps.LibGit2_jll]] | ||
deps = ["Artifacts", "LibSSH2_jll", "Libdl", "MbedTLS_jll"] | ||
uuid = "e37daf67-58a4-590a-8e99-b0245dd2ffc5" | ||
version = "1.7.2+0" | ||
|
||
[[deps.LibSSH2_jll]] | ||
deps = ["Artifacts", "Libdl", "MbedTLS_jll"] | ||
uuid = "29816b5a-b9ab-546f-933c-edad1886dfa8" | ||
version = "1.11.0+1" | ||
|
||
[[deps.Libdl]] | ||
uuid = "8f399da3-3557-5675-b5ff-fb832c97cbdb" | ||
version = "1.11.0" | ||
|
||
[[deps.Libiconv_jll]] | ||
deps = ["Artifacts", "JLLWrappers", "Libdl"] | ||
git-tree-sha1 = "61dfdba58e585066d8bce214c5a51eaa0539f269" | ||
uuid = "94ce4f54-9a6c-5748-9c1c-f9c7231a4531" | ||
version = "1.17.0+1" | ||
|
||
[[deps.Logging]] | ||
uuid = "56ddb016-857b-54e1-b83d-db4d58db5568" | ||
version = "1.11.0" | ||
|
||
[[deps.LoggingExtras]] | ||
deps = ["Dates", "Logging"] | ||
git-tree-sha1 = "f02b56007b064fbfddb4c9cd60161b6dd0f40df3" | ||
uuid = "e6f89c97-d47a-5376-807f-9c37f3926c36" | ||
version = "1.1.0" | ||
|
||
[[deps.Markdown]] | ||
deps = ["Base64"] | ||
uuid = "d6f4376e-aef5-505a-96c1-9c027394607a" | ||
version = "1.11.0" | ||
|
||
[[deps.MbedTLS]] | ||
deps = ["Dates", "MbedTLS_jll", "MozillaCACerts_jll", "NetworkOptions", "Random", "Sockets"] | ||
git-tree-sha1 = "c067a280ddc25f196b5e7df3877c6b226d390aaf" | ||
uuid = "739be429-bea8-5141-9913-cc70e7f3736d" | ||
version = "1.1.9" | ||
|
||
[[deps.MbedTLS_jll]] | ||
deps = ["Artifacts", "Libdl"] | ||
uuid = "c8ffd9c3-330d-5841-b78e-0817d7145fa1" | ||
version = "2.28.6+0" | ||
|
||
[[deps.MozillaCACerts_jll]] | ||
uuid = "14a3606d-f60d-562e-9121-12d972cd8159" | ||
version = "2023.12.12" | ||
|
||
[[deps.NetworkOptions]] | ||
uuid = "ca575930-c2e3-43a9-ace4-1e988b2c1908" | ||
version = "1.2.0" | ||
|
||
[[deps.OpenSSL]] | ||
deps = ["BitFlags", "Dates", "MozillaCACerts_jll", "OpenSSL_jll", "Sockets"] | ||
git-tree-sha1 = "38cb508d080d21dc1128f7fb04f20387ed4c0af4" | ||
uuid = "4d8831e6-92b7-49fb-bdf8-b643e874388c" | ||
version = "1.4.3" | ||
|
||
[[deps.OpenSSL_jll]] | ||
deps = ["Artifacts", "JLLWrappers", "Libdl"] | ||
git-tree-sha1 = "7493f61f55a6cce7325f197443aa80d32554ba10" | ||
uuid = "458c3c95-2e84-50aa-8efc-19380b2a3a95" | ||
version = "3.0.15+1" | ||
|
||
[[deps.PCRE2_jll]] | ||
deps = ["Artifacts", "Libdl"] | ||
uuid = "efcefdf7-47ab-520b-bdef-62a2eaa19f15" | ||
version = "10.42.0+1" | ||
|
||
[[deps.Pkg]] | ||
deps = ["Artifacts", "Dates", "Downloads", "FileWatching", "LibGit2", "Libdl", "Logging", "Markdown", "Printf", "Random", "SHA", "TOML", "Tar", "UUIDs", "p7zip_jll"] | ||
uuid = "44cfe95a-1eb2-52ea-b672-e2afdf69b78f" | ||
version = "1.11.0" | ||
weakdeps = ["REPL"] | ||
|
||
[deps.Pkg.extensions] | ||
REPLExt = "REPL" | ||
|
||
[[deps.PrecompileTools]] | ||
deps = ["Preferences"] | ||
git-tree-sha1 = "5aa36f7049a63a1528fe8f7c3f2113413ffd4e1f" | ||
uuid = "aea7be01-6a6a-4083-8856-8a6e6704d82a" | ||
version = "1.2.1" | ||
|
||
[[deps.Preferences]] | ||
deps = ["TOML"] | ||
git-tree-sha1 = "9306f6085165d270f7e3db02af26a400d580f5c6" | ||
uuid = "21216c6a-2e73-6563-6e65-726566657250" | ||
version = "1.4.3" | ||
|
||
[[deps.Printf]] | ||
deps = ["Unicode"] | ||
uuid = "de0858da-6303-5e67-8744-51eddeeeb8d7" | ||
version = "1.11.0" | ||
|
||
[[deps.ProgressLogging]] | ||
deps = ["Logging", "SHA", "UUIDs"] | ||
git-tree-sha1 = "80d919dee55b9c50e8d9e2da5eeafff3fe58b539" | ||
uuid = "33c8b6b6-d38a-422a-b730-caa89a2f386c" | ||
version = "0.1.4" | ||
|
||
[[deps.REPL]] | ||
deps = ["InteractiveUtils", "Markdown", "Sockets", "StyledStrings", "Unicode"] | ||
uuid = "3fa0cd96-eef1-5676-8a61-b3b8758bbffb" | ||
version = "1.11.0" | ||
|
||
[[deps.Random]] | ||
deps = ["SHA"] | ||
uuid = "9a3f8284-a2c9-5f02-9a11-845980a1fd5c" | ||
version = "1.11.0" | ||
|
||
[[deps.SHA]] | ||
uuid = "ea8e919c-243c-51af-8825-aaa63cd721ce" | ||
version = "0.7.0" | ||
|
||
[[deps.Serialization]] | ||
uuid = "9e88b42a-f829-5b0c-bbe9-9e923198166b" | ||
version = "1.11.0" | ||
|
||
[[deps.SimpleBufferStream]] | ||
git-tree-sha1 = "f305871d2f381d21527c770d4788c06c097c9bc1" | ||
uuid = "777ac1f9-54b0-4bf8-805c-2214025038e7" | ||
version = "1.2.0" | ||
|
||
[[deps.Sockets]] | ||
uuid = "6462fe0b-24de-5631-8697-dd941f90decc" | ||
version = "1.11.0" | ||
|
||
[[deps.StyledStrings]] | ||
uuid = "f489334b-da3d-4c2e-b8f0-e476e12c162b" | ||
version = "1.11.0" | ||
|
||
[[deps.TOML]] | ||
deps = ["Dates"] | ||
uuid = "fa267f1f-6049-4f14-aa54-33bafae1ed76" | ||
version = "1.0.3" | ||
|
||
[[deps.Tar]] | ||
deps = ["ArgTools", "SHA"] | ||
uuid = "a4e569a6-e804-4fa4-b0f3-eef7a1d5b13e" | ||
version = "1.10.0" | ||
|
||
[[deps.Test]] | ||
deps = ["InteractiveUtils", "Logging", "Random", "Serialization"] | ||
uuid = "8dfed614-e22c-5e08-85e1-65c5234f0b40" | ||
version = "1.11.0" | ||
|
||
[[deps.TranscodingStreams]] | ||
git-tree-sha1 = "0c45878dcfdcfa8480052b6ab162cdd138781742" | ||
uuid = "3bb67fe8-82b1-5028-8e26-92a6c54297fa" | ||
version = "0.11.3" | ||
|
||
[[deps.URIs]] | ||
git-tree-sha1 = "67db6cc7b3821e19ebe75791a9dd19c9b1188f2b" | ||
uuid = "5c2747f8-b7ea-4ff2-ba2e-563bfd36b1d4" | ||
version = "1.5.1" | ||
|
||
[[deps.UUIDs]] | ||
deps = ["Random", "SHA"] | ||
uuid = "cf7118a7-6976-5b1a-9a39-7adc72f591a4" | ||
version = "1.11.0" | ||
|
||
[[deps.Unicode]] | ||
uuid = "4ec0a83e-493e-50e2-b9ac-8f72acf5a8f5" | ||
version = "1.11.0" | ||
|
||
[[deps.Zlib_jll]] | ||
deps = ["Libdl"] | ||
uuid = "83775a58-1f1d-513f-b197-d71354ab007a" | ||
version = "1.2.13+1" | ||
|
||
[[deps.gh_cli_jll]] | ||
deps = ["Artifacts", "JLLWrappers", "Libdl"] | ||
git-tree-sha1 = "b54ff233a6a183ad366d29fa0e3ff9bb921692db" | ||
uuid = "5d31d589-30fb-542f-b82d-10325e863e38" | ||
version = "2.35.0+0" | ||
|
||
[[deps.nghttp2_jll]] | ||
deps = ["Artifacts", "Libdl"] | ||
uuid = "8e850ede-7688-5339-a07c-302acd2aaf8d" | ||
version = "1.59.0+0" | ||
|
||
[[deps.p7zip_jll]] | ||
deps = ["Artifacts", "Libdl"] | ||
uuid = "3f19e933-33d8-53b3-aaab-bd5110c3b7a0" | ||
version = "17.4.0+2" |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,2 @@ | ||
[deps] | ||
ClimaArtifactsHelper = "6ffa2572-8378-4377-82eb-ea11db28b255" |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,16 @@ | ||
# Water conservation test dataset | ||
|
||
This dataset is used as a reference solution for a particular setup of the | ||
ClimaLand.jl soil water model (`RichardsModel`). It was created by running | ||
the `water_conservation.jl` experiment with an explicit solver and a very | ||
small timestep. To recreate it, we need to check out a commit of ClimaLand.jl | ||
where this type of model was stepped fully explicitly; it has since been changed | ||
to be stepped with a mixed implicit/explicit algorithm. | ||
|
||
Since the experiment is run with an explicit solver and small timestep, | ||
it takes a while to run and produce the artifacts. Expect a runtime of around | ||
8 hours for the artifact generation. | ||
|
||
Note that if the physics implemented in `RichardsModel` changes, this dataset | ||
will need to be regenerated so it can still be used as a comparison for the | ||
current code. |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,20 @@ | ||
using ClimaArtifactsHelper | ||
|
||
# Set the output directory | ||
output_dir = basename(@__DIR__) * "_artifact" | ||
if isdir(output_dir) | ||
@warn "$output_dir already exists. Content will end up in the artifact and may be overwritten." | ||
@warn "Abort this calculation, unless you know what you are doing." | ||
else | ||
mkdir(output_dir) | ||
end | ||
|
||
# Run the bash script to create the artifact | ||
run(`bash run_water_conservation_exp.sh $output_dir`) | ||
|
||
@info "Data file generated!" | ||
|
||
create_artifact_guided( | ||
output_dir; | ||
artifact_name = basename(@__DIR__), | ||
) |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,30 @@ | ||
#!/bin/bash | ||
|
||
# This script checks out a specific commit of the ClimaLand.jl GitHub | ||
# repository, and uses it to run the provided `water_conservation_exp.jl` | ||
# experiment. That file will run the experiments with both flux and Dirichlet | ||
# boundary conditions, and save the solution results. | ||
# The output data files are saved in the paths water_conserv_exp/ref_soln_flux.csv | ||
# and water_conserv_exp/ref_soln_dirichlet.csv, relative to the directory | ||
# where this script is run.# Note that this script requires juliaup to be installed. | ||
|
||
# Inform the user that the script requires one input argument, if it is not provided | ||
[[ $# -lt 1 ]] && echo "Error! Usage: $0 <output_dir>" && exit 0 | ||
|
||
# Parse the input argument for the output directory | ||
output_dir=$1 | ||
mkdir -p $output_dir | ||
|
||
# Clone the ClimaLand.jl repository | ||
git clone https://github.com/CliMA/ClimaLand.jl.git | ||
cd ClimaLand.jl | ||
|
||
# Checkout the commit that we know has what we need | ||
git -c advice.detachedHEAD=false checkout d7cc27a9b33227cfc1aa3745a94f3ffcc595fa5c | ||
|
||
# Run the experiment using an older version of Julia (requires juliaup) | ||
juliaup add 1.9.0 | ||
julia +1.9.0 --project=experiments -e 'using Pkg; Pkg.add(;name="ClimaTimeSteppers", version="0.7.7")' | ||
|
||
echo "Running the water conservation experiment..." | ||
julia +1.9.0 --project=experiments ../water_conservation_exp.jl $output_dir |
Oops, something went wrong.