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Update some of the programs bundled with the ODK:
Also add a note to remind us that we cannot update Jena to version 5, as that version requires Java >= 17 and the ODK base image still provides Java 11 for now.
There is a 3.0.0 version of Ammonite since september 2024, but we do not upgrade it for now because (1) I don't know or use Ammonite enough (at all, actually) to know whether the new major version is likely to break any existing custom workflow that requires Ammonite, and (2) Jim Balhoff is keen to migrate from Ammonite to Scala-CLI anyway (#1162).