First attempt at a shallow merge of VALSO-VALTRANS and VALNA, issue #6.

Standard VALSO-VALTRANS metrics and plotting work. VALNA metrics are
calculated but some work to do on the plotting.

ERROR.txt

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+E R R O R in : ./mk_trp.bash u-cl518 19841201 1y (see SLURM/u-cl518/mk_trp_ACC_1y_19841201.out)

FILTERS/filter_grid-T

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+--cnk_dmn deptht,1 --cnk_dmn time_counter,1 --cnk_dmn x,200 --cnk_dmn y,200 -v (^thetao$)+,(^thetao_con$)+,(^votemper$)+,(^so$)+,(^so_abs$)+,(^vosaline$)+,(^zos$)+,(^sossheig$)+,(^somxzint1$)+,(^sokaraml$)+,(^hfds$)+,(^sohefldo$)+,(^soicecov$)+

FILTERS/filter_grid-U

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+--cnk_dmn depthu,1 --cnk_dmn time_counter,1 --cnk_dmn x,200 --cnk_dmn y,200 --dfl_lvl 1 -v (^uo$)+,(^vozocrtx$)+,(^e3u$)+,(^thkcello$)+,(^tauuo$)+,(^sozotaux$)+

FILTERS/filter_grid-V

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+--cnk_dmn depthv,1 --cnk_dmn time_counter,1 --cnk_dmn x,200 --cnk_dmn y,200 --dfl_lvl 1 -v (^vo$)+,(^vomecrty$)+,(^e3v$)+,(^thkcello$)+

OBS/ACC_bottom_obs.txt

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+ref = Donohue et al, GRL (2016)
+mean = 45.6
+std = 8.9

OBS/ACC_obs.txt

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+ref = Donohue et al, GRL (2016)
+mean = 173
+std = 11

OBS/ACC_shelfbreak_obs.txt

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+ref = Meijers et al, JGR(Oceans) (2016)
+mean = 1.5
+std = 1.5

OBS/AMHT_obs.txt

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+ref = RAPID
+mean = 1.2
+std = 0.1
+# 2004-2018

OBS/AMOC_max_obs.txt

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+ref = RAPID
+mean = 17.1
+std = 1.5
+# 2004-2018 annual av

OBS/AMOC_obs.txt

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+ref = L. Jackson
+mean = 17.5
+std = 2.5

OBS/AMU_deepT_mean_obs.txt

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+ref = EN4.2.2.g10 profile data, Good et al (2013), Storkey et al (to be submitted to GMD)
+mean = 1.04
+std = 0.25

OBS/ANT_sie02_obs.txt

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+ref = P. Mathiot 
+mean = 3
+std = 1

OBS/ANT_sie09_obs.txt

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+ref = P. Mathiot 
+mean = 18.5
+std = 1.5

OBS/ARC_sie03_obs.txt

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+ref = P. Mathiot 
+mean = 15.3
+std = 1.0

OBS/ARC_sie09_obs.txt

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+ref = P. Mathiot 
+mean = 6.3
+std = 1

OBS/BabElMandeb_obs.txt

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+ref = Xie et al, JGR(Oceans) 124 (2018)
+mean = 0.35
+std = 0.02

OBS/DenmarkStraitLL_obs.txt~

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+ref = P. Mathiot 
+mean = 175
+std = 25

OBS/DenmarkStrait_obs.txt

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+ref = Macrander et al GRL, 32 (2005); Aagaard and Malmberg ICES, CM 1978/C:47 (1978); Dickson and Brown, JGR 99 (1994),
+mean = 3.2
+std = 0.5

OBS/DenmarkStrait_obs.txt~

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+ref = D. Storkey 
+mean = 3.0
+std = 1.0

OBS/EROSS_deepT_mean_obs.txt

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+ref = EN4.2.2.g10 profile data, Good et al (2013), Storkey et al (to be submitted to GMD)
+mean = -1.81
+std = 0.09

OBS/FaroeBankChannel_obs.txt

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+ref = Hansen et al, Prog Oceanography 75 (2007)
+mean = 1.9
+std = 0.3

OBS/GS_sep_lat_obs.txt

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+ref = EN4 temperature
+mean = 37.2
+std = 0.4

OBS/Gibraltar_obs.txt

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+ref = Soto-Navarro et al, JGR(Oceans) 115 (2010)
+mean = 0.78
+std = 0.05

OBS/HTC_subp_obs.txt

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+ref = EN4
+mean = 1.5355417513870916E23
+std = 2.2547946295631185E21

OBS/LombokStrait_obs.txt

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+ref = Sprintall et al, JGR(Oceans) 114 (2009)
+mean = 2.6
+min = 1.8
+max = 3.2

OBS/MXL_lab_max_obs.txt

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+ref = ifremer dataset 0.03 kg/m3 threshold
+mean = -974
+std = 0
+#1941 - 2002

OBS/MXL_lab_mean_obs.txt

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+ref = ifremer dataset 0.03 kg/m3 threshold
+mean = -489
+std = 235
+#1941 - 2002

OBS/NAC_lat_obs.txt

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+ref = EN4 temperature
+mean = 51.2
+std = 0.6

OBS/NWC_sst_mean_obs.txt

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+ref = P. Mathiot
+mean = 12.1
+std = 1.

OBS/OVF_S_eel_obs.txt

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+ref = EEL Xsection from nsv standardiser
+mean = 34.95592763
+std = 0.01379818
+# 15 years, 1996-2017, some years are missing

OBS/OVF_S_hansen_obs.txt

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+ref = Hansen 2000 from nsv standardiser
+mean = 34.90626667
+std = 0.
+# no time dimen

OBS/OVF_S_kogur_obs.txt

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+ref = Kogur Xsection from nsv standardiser
+mean = 34.88384838
+std = 0.00559513
+# 2011 sept - 2012 july

OBS/OVF_S_latrabjarg_clim_obs.txt

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+ref = Latrabjarg from nsv standardiser
+mean = 34.84691209
+std = 0
+# no time series

OBS/OVF_S_osnap_icel_obs.txt

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+ref = OSNAP from nsv standardiser
+mean = 34.933804
+std = 0.0020512
+# 2014-2016, Icelandic basin only

OBS/OVF_S_osnap_irminger_obs.txt

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+ref = OSNAP from nsv standardiser
+mean = 34.933804
+std = 0.0020512
+# 2014-2016, Irminger basin only

OBS/OVF_S_osnap_obs.txt

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+ref = OSNAP from nsv standardiser
+mean = 34.947037
+std = 0.00142154
+# 2014-2016, Irminger and Icelandic basins

OBS/OVF_S_ovide_icel_obs.txt

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+ref = OVIDE
+mean = 34.94983169
+std = 0.00509406
+# 6 years, 2002-2012, cropped to Icelandic basin

OBS/OVF_T_eel_obs.txt

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+ref = EEL Xsection from nsv standardiser
+mean = 3.21952773
+std = 0.11272316
+# 15 years, 1996-2017, some years are missing

OBS/OVF_T_hansen_obs.txt

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+ref = Hansen 2000 from nsv standardiser
+mean = 0.05831493
+std = 0.
+# no time dimen

OBS/OVF_T_kogur_obs.txt

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+ref = Kogur Xsection from nsv standardiser
+mean = 0.35019253
+std = 0.08281083
+# 2011 sept - 2012 july

OBS/OVF_T_latrabjarg_clim_obs.txt

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+ref = Latrabjarg from nsv standardiser
+mean = 0.69057989
+std = 0
+# no time series

OBS/OVF_T_osnap_icel_obs.txt

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+ref = OSNAP from nsv standardiser
+mean = 3.03233039
+std = 0.0182862
+# 2014-2016, Icelandic basin only

OBS/OVF_T_osnap_irminger_obs.txt

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+ref = OSNAP from nsv standardiser
+mean = 2.90767408
+std = 0.0308461
+# 2014-2016, Irminger basin only

OBS/OVF_T_osnap_obs.txt

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+ref = OSNAP from nsv standardiser
+mean = 2.96945723
+std = 0.01964481
+# 2014-2016, Irminger and Icelandic basins

OBS/OVF_T_ovide_icel_obs.txt

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+ref = OVIDE
+mean = 2.90064253
+std = 0.04285094
+# 6 years, 2002-2012, cropped to Icelandic basin

OBS/OmbaiStrait_obs.txt

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+ref = Sprintall et al, JGR(Oceans) 114 (2009)
+mean = 4.9
+min = 2.7
+max = 5.0
+

OBS/RG_obs.txt

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+ref = Dotto et al, GRL (2018)
+mean = 23
+std = 8

OBS/SO_sst_mean_obs.txt

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+ref = EN4.1.1.g10 (Good et al 2013), climatology for 1950-1954. (Std dev taken from 4.2.2.g10).
+mean = 3.6
+std = 0.1

OBS/SSS_LabSea_obs.txt

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+ref = EN4
+mean = 33.97744108143307
+std = 0.13480149124388918

OBS/SST_newf_obs.txt

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+ref = EN4
+mean = 13.90855617900697
+std = 0.5102101109813537

OBS/SUBP_PSI_obs.txt

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+ref = dummy values
+mean =
+std =

OBS/StraitOfHormuz_obs.txt

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+ref = Vasou et al, Ocean Dynamics (2020)
+mean = 0.22
+std = 0.01

OBS/TimorPassage_obs.txt

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+ref = Sprintall et al, JGR(Oceans) 114 (2009)
+mean = 7.5
+min = 6.2
+max = 10.5

OBS/WG_karamld_max_obs.txt

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+ref = P. Mathiot
+mean = 200
+std = 150

OBS/WG_obs.txt

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+ref = Klatt et al, Deep-Sea Research II (2005)
+mean = 56
+std = 8

OBS/WROSS_deepS_mean_obs.txt

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+ref = EN4.2.2.g10 profile data, Good et al (2013), Storkey et al (to be submitted to GMD)
+mean = 34.83
+std = 0.22

OBS/WWED_deepS_mean_obs.txt

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+ref = EN4.2.2.g10 profile data, Good et al (2013), Storkey et al (to be submitted to GMD)
+mean = 34.83
+std = 0.04