Update README.md #101
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: pipeline | |
| on: | |
| pull_request: | |
| push: | |
| branches: [master] | |
| jobs: | |
| test-job: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| python-version: ["3.10", "3.11", "3.12"] | |
| pymc-version: ["without", "'pymc>=5.0.0'"] | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: mamba-org/setup-micromamba@v2 | |
| with: | |
| environment-file: environment-dev.yml | |
| create-args: >- | |
| python=${{ matrix.python-version }} | |
| - name: Install dependencies | |
| run: | | |
| conda activate murefi-env | |
| pip install -e . | |
| - name: Lint with flake8 | |
| run: | | |
| # stop the build if there are Python syntax errors or undefined names | |
| flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics | |
| # exit-zero treats all errors as warnings | |
| flake8 . --count --exit-zero --statistics | |
| - name: Test without PyMC | |
| if: matrix.pymc-version == 'without' | |
| run: | | |
| pytest --cov=./murefi --cov-append --cov-report xml --cov-report term-missing murefi/tests.py | |
| - name: Install and test with PyMC | |
| if: matrix.pymc-version != 'without' | |
| run: | | |
| pip install ${{ matrix.pymc-version }} | |
| pytest --cov=./murefi --cov-append --cov-report xml --cov-report term-missing murefi/tests.py | |
| - name: Install and test with sunode | |
| if: matrix.pymc-version != 'without' | |
| run : | | |
| mamba install "sunode>=0.5.0" | |
| pytest --cov=./murefi --cov-append --cov-report xml --cov-report term-missing murefi/tests.py | |
| - name: Upload coverage | |
| uses: codecov/codecov-action@v4 | |
| if: matrix.python-version == 3.11 | |
| with: | |
| file: ./coverage.xml | |
| - name: Test Wheel install and import | |
| run: | | |
| python setup.py bdist_wheel | |
| cd dist | |
| pip install murefi*.whl | |
| python -c "import murefi; print(murefi.__version__)" |