Merge pull request #144 from dbhaskar92/update-license #85
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| name: Unit Tests | |
| on: | |
| push: | |
| branches-ignore: | |
| - 'test_deploy' | |
| pull_request: | |
| branches: | |
| - '*' | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.ref }} | |
| cancel-in-progress: true | |
| jobs: | |
| run_linter: | |
| runs-on: ${{ matrix.config.os }} | |
| if: "!contains(github.event.head_commit.message, 'ci skip')" | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| config: | |
| - {name: 'current', os: ubuntu-latest, python: '3.8' } | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Set up Python | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ matrix.config.python }} | |
| - name: Install tools | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install -U wheel setuptools | |
| pip install -U black flake8 | |
| - name: Lint with Black | |
| run: | | |
| cd Python | |
| black . --check --diff | |
| - name: Lint with flake8 | |
| run: | | |
| flake8 phate || true | |
| run_tester: | |
| runs-on: ${{ matrix.config.os }} | |
| if: "!contains(github.event.head_commit.message, 'ci skip')" | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| config: | |
| - {name: '3.11', os: ubuntu-latest, python: '3.11' } | |
| - {name: '3.10', os: ubuntu-latest, python: '3.10' } | |
| - {name: '3.9', os: ubuntu-latest, python: '3.9' } | |
| - {name: '3.8', os: ubuntu-latest, python: '3.8' } | |
| - {name: '3.7', os: ubuntu-latest, python: '3.7' } | |
| steps: | |
| - uses: actions/checkout@v2 | |
| with: | |
| fetch-depth: 0 | |
| - name: Install system dependencies | |
| if: runner.os == 'Linux' | |
| run: | | |
| sudo apt-get update -qq | |
| sudo apt-get install -y libhdf5-dev libhdf5-serial-dev pandoc gfortran libblas-dev liblapack-dev libedit-dev llvm-dev libcurl4-openssl-dev ffmpeg | |
| - name: Set up Python | |
| uses: actions/setup-python@v2 | |
| with: | |
| python-version: ${{ matrix.config.python }} | |
| - name: Cache Python packages | |
| uses: actions/cache@v2 | |
| with: | |
| path: ${{ env.pythonLocation }} | |
| key: ${{runner.os}}-${{ matrix.config.python }}-pip-${{ env.pythonLocation }}-${{ hashFiles('setup.py') }} | |
| restore-keys: ${{runner.os}}-${{ matrix.config.python }}-pip-${{ env.pythonLocation }}- | |
| - name: Install package & dependencies | |
| run: | | |
| cd Python | |
| python -m pip install --upgrade pip | |
| pip install -U wheel setuptools | |
| pip install -U --prefer-binary .[test] | |
| python -c "import phate" | |
| - name: Run tests | |
| run: | | |
| cd Python | |
| nose2 -vvv | |
| - name: Coveralls | |
| env: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| COVERALLS_SERVICE_NAME: github | |
| run: | | |
| coveralls | |
| - name: Upload check results on fail | |
| if: failure() | |
| uses: actions/upload-artifact@master | |
| with: | |
| name: ${{ matrix.config.name }}_results | |
| path: check |