chore: restructure

Mangul-Lab-USC · Jun 17, 2024 · b508e00 · b508e00
1 parent d2af7fe
commit b508e00
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Showing 14 changed files with 229 additions and 226 deletions.
diff --git a/NAMESPACE b/NAMESPACE
@@ -1,15 +1,15 @@
 # Generated by roxygen2: do not edit by hand
 
 export("%>%")
+export(get_bottom_n_clonotypes)
 export(get_study)
-export(plot_reads_group_abundance)
-export(plot_clonal_prop_per_sample)
+export(get_top_n_clonotypes)
 export(plot_clonal_prop_per_group)
+export(plot_clonal_prop_per_sample)
 export(plot_clonotype_abundance)
-export(get_bottom_n_clonotypes)
-export(get_top_n_clonotypes)
 export(plot_diversity_index)
 export(plot_motif_counts)
+export(plot_reads_group_abundance)
 exportClasses(Basic)
 exportClasses(Clonality)
 exportClasses(Diversity)

diff --git a/R/plot_clonal_prop_per_group.R b/R/plot_clonal_prop_per_group.R
diff --git a/R/plot_clonal_prop_per_sample.R b/R/plot_clonal_prop_per_sample.R
diff --git a/R/plot_clonotype_abundance.R b/R/plot_clonotype_abundance.R
diff --git a/R/plot_reads_group_abundance.R b/R/plot_reads_group_abundance.R