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Add missing Perl lib in docker + Fix bin/env perl path
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smoretti committed Nov 18, 2021
1 parent 67b2924 commit c100c34
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Showing 4 changed files with 4 additions and 6 deletions.
4 changes: 1 addition & 3 deletions container/Dockerfile
Original file line number Diff line number Diff line change
Expand Up @@ -29,7 +29,7 @@ LABEL mnx.lang.r.version="4.1.2"
RUN echo '# OS update' \
&& export DEBIAN_FRONTEND=noninteractive \
&& apt-get update -y \
&& apt-get install -y --no-install-recommends perl libperl-dev liblog-log4perl-perl libdigest-crc-perl libtest-simple-perl libmath-bigint-perl wget cmake make libexpat1-dev swig libbz2-dev zlib1g-dev liblzma-dev check gcc g++ gfortran python3 libexpat1 libbz2-1.0 zlib1g liblzma5 parallel patchelf gnupg apt-utils ca-certificates libterm-readline-gnu-perl readline-common software-properties-common dirmngr git git-lfs \
&& apt-get install -y --no-install-recommends perl libperl-dev libmodule-runtime-perl liblog-log4perl-perl libdigest-crc-perl libtest-simple-perl libmath-bigint-perl wget cmake make libexpat1-dev swig libbz2-dev zlib1g-dev liblzma-dev check gcc g++ gfortran python3 libexpat1 libbz2-1.0 zlib1g liblzma5 parallel patchelf gnupg apt-utils ca-certificates libterm-readline-gnu-perl readline-common software-properties-common dirmngr git \
&& echo '# Install R (in a non-interactive way)' \
&& echo '# See https://cran.r-project.org/bin/linux/ubuntu/' \
&& echo '# Signature of Ubuntu archives on CRAN' \
Expand All @@ -43,8 +43,6 @@ RUN echo '# OS update' \
&& cd /usr/local \
&& git clone https://github.com/MetaNetX/MNXtools.git \
&& cd MNXtools/bin/ \
&& git lfs install \
&& git lfs pull \
&& ln -s $PWD/* /usr/local/bin/ \
&& echo '# Install Perl libSBML' \
&& cd /usr/local/ \
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2 changes: 1 addition & 1 deletion test/mnet_diff.pl
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@@ -1,4 +1,4 @@
#!/bin/env perl
#!/usr/bin/env perl

use strict;

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2 changes: 1 addition & 1 deletion test/run_test.pl
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
#!/bin/env perl
#!/usr/bin/env perl

use strict;

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2 changes: 1 addition & 1 deletion test/tab_diff.pl
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@@ -1,4 +1,4 @@
#!/bin/env perl
#!/usr/bin/env perl

use strict;

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