Norway/Sweden training

Download presentation C3S.pdf

http://bit.ly/C3S-NO-SE

Data extraction and easy visualization with galaxy climate science workbench

Author: Anne Fouilloux

Set up for workshop

• Register and log in to https://climate.usegalaxy.eu
  • You may receive an e-mail with an activation link
• Go to the following URL: https://usegalaxy.eu/join-training/c3s to join the c3s training group - Give us higher priority for running: valid on 6th March 2020 only!. Skip this step if you join on a different day.

General introduction to Galaxy

• Galaxy 101 for everyone

Panoply in Galaxy

• Visualize Climate data with Panoply netCDF viewer

Pangeo JupyterLab in Galaxy

pangeo Jupyterlab with all the software stack (python packages) and data is available on Galaxy.

• Go to JupyterLabfor Ocean/Atmosphere/Land/Climate python ecosystem

• A more comprehensive tutorial can be found here

Learn more about Galaxy

• Galaxy 101 for everyone
• Visualize Climate data with Panoply netCDF viewer
• JupyterLab in Galaxy (**please make sure to use the a target="_blank" href="https://live.usegalaxy.eu/?tool_id=interactive_tool_climate_notebook">JupyterLabfor Ocean/Atmosphere/Land/Climate python ecosystem rather than the default jupyterLab environment (that does not contain any climate related packages).
• Import shared histories (click on the link)
  • Copernicus Climate Training: Panoply
  • Copernicus Climate Training: How to use climate data for Olive farming in Andalusia
  • Copernicus Climate Training: the ALPS -a dying ski tourism destination?