Replace .giveBack with .transformReplace

Rather than .giveBack a crafted item leftover such as a bucket to the
players inventory, use .transformReplace to replace the item in the actual
crafting grid. This will prevent unwanted behaviour in several crafting
tables.

Known issues:
Both .giveBack and .transformReplace minetweaker functions will cause
problems with crafting devices having "ghost" or template items in the
crafting grid. .giveBack will cause the item used to craft to be
duplicated and .transformReplace will cause the item to be consumed
rather than given back. Known blocks/items to cause this include:

-Project & Auto Benches (ProjectRed)
-Worktable (Forestry)
-Workbench Backpacks (Backpacks)