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update show_plot descripiton in parameters
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jcharkow committed Jan 8, 2025
1 parent 7f1210e commit d7dae4c
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Showing 5 changed files with 8 additions and 8 deletions.
2 changes: 1 addition & 1 deletion docs/Parameters/basePlot.tsv
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Expand Up @@ -12,4 +12,4 @@ toolbar_location “above” Location of toolbar for interactive plots. One of:
fig None fig Existing Figure object to plot on
xlabel None str Label for x axis
ylabel None str Label for y axis
show_plot True bool Whether to display the plot
show_plot True bool Whether to display the plot. If plot is not shown, will return the plot object corresponding with the backend. If plot is displayed the method returns None
2 changes: 1 addition & 1 deletion docs/Parameters/chromatogramPlot.tsv
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Expand Up @@ -12,4 +12,4 @@ toolbar_location “above” Location of toolbar for interactive plots. One of:
fig None fig Existing figure object to plot on. Useful for matplotlib backend
xlabel None str Label for x axis
ylabel None str Label for y axis
show_plot True bool Whether to display the plot
show_plot True bool Whether to display the plot. If plot is not shown, will return the plot object corresponding with the backend. If plot is displayed the method returns None
2 changes: 1 addition & 1 deletion docs/Parameters/mobilogramPlot.tsv
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Expand Up @@ -12,4 +12,4 @@ toolbar_location “above” Location of toolbar for interactive plots. One of:
fig None fig Existing figure object to plot on. Useful for matplotlib backend
xlabel None str Label for x axis
ylabel None str Label for y axis
show_plot True bool Whether to display the plot
show_plot True bool Whether to display the plot. If plot is not shown, will return the plot object corresponding with the backend. If plot is displayed the method returns None
8 changes: 4 additions & 4 deletions docs/Parameters/peakMapPlot.tsv
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Expand Up @@ -14,10 +14,10 @@ fig None fig Existing Figure object to plot on. Useful for matplotlib backend wh
xlabel “” str Label for x axis
ylabel “” str Label for y axis
zlabel '’ str Label for z-axis
show_plot True bool Whether to display the plot
bin_peaks
show_plot True bool Whether to display the plot. If plot is not shown, will return the plot object corresponding with the backend. If plot is displayed the method returns None
bin_peaks False bool | “auto” If True, will bin peaks based on specified number of bins in `num_x_bins`. If "auto", will automatically determine the number of bins based on the data using the strategy specified in `bin_method`.
aggregation_method “mean” Literal[“mean”, “sum”, “max”] How to aggregate duplicate entries
num_x_bins 50 int Number of x-bins in heatmap
num_y_bins 50 int Number of y-bins in heatmap
z_log_scale False
fill_by_z True bool
z_log_scale False bool Whether to log-transform z-axis
fill_by_z True bool Whether heatmap coloring should be based on z-axis values
2 changes: 1 addition & 1 deletion docs/Parameters/spectrumPlot.tsv
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Expand Up @@ -13,7 +13,7 @@ toolbar_location “above” Location of toolbar for interactive plots. One of:
fig None fig Existing Figure object to plot on
xlabel None str Label for x axis
ylabel None str Label for y axis
show_plot True bool Whether to display the plot
show_plot True bool Whether to display the plot. If plot is not shown, will return the plot object corresponding with the backend. If plot is displayed the method returns None
bin_peaks False bool | “auto” If True, will bin peaks based on specified number of bins in `num_x_bins`. If "auto", will automatically determine the number of bins based on the data using the strategy specified in `bin_method`.
bin_method “mz-tol-bin” Binning method, one of [ “none”, “sturges”, “freedman-diaconis”, “mz-tol-bin”]
num_x_bins 50 int Number of bins, will be adjusted if bin_peaks is “auto”
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