Fix spelling errors.

cubids/cubids.py

@@ -709,11 +709,11 @@ def copy_exemplars(self, exemplars_dir, exemplars_tsv, min_group_size):
         ----------
         exemplars_dir : :obj:`str`
             path to the directory that will contain one subject
-            from each Acqusition Group (*_AcqGrouping.tsv)
+            from each Acquisition Group (*_AcqGrouping.tsv)
             example path: /Users/Covitz/tsvs/CCNP_Acq_Groups/
         exemplars_tsv : :obj:`str`
             path to the .tsv file that lists one subject
-            from each Acqusition Group (*_AcqGrouping.tsv
+            from each Acquisition Group (*_AcqGrouping.tsv
             from the cubids-group output)
             example path: /Users/Covitz/tsvs/CCNP_Acq_Grouping.tsv
         min_group_size : :obj:`int`
@@ -923,7 +923,7 @@ def get_nifti_associations(self, nifti):
             A list of paths to files associated with the given NIfTI file, excluding
             the NIfTI file itself.
         """
-        # get all assocation files of a nifti image
+        # get all association files of a nifti image
         no_ext_file = str(nifti).split("/")[-1].split(".")[0]
         associations = []
         for path in Path(self.path).rglob(f"sub-*/**/{no_ext_file}.*"):

cubids/workflows.py

@@ -396,7 +396,7 @@ def copy_exemplars(
     if use_datalad:
         if not bod.is_datalad_clean():
             raise Exception(
-                "Untracked changes. Need to save " + str(bids_dir) + " before coyping exemplars"
+                "Untracked changes. Need to save " + str(bids_dir) + " before copying exemplars"
             )
     bod.copy_exemplars(
         str(exemplars_dir),

docs/example.rst

@@ -185,8 +185,8 @@ BIDS validation
     but can be slowed down by extremely large datasets.
 
 .. warning::
-    For internetless use cases, please see dedicated section of the `Installation page 
-    <https://cubids.readthedocs.io/en/latest/installation.html>`_ on how to download a local version 
+    For internetless use cases, please see dedicated section of the `Installation page
+    <https://cubids.readthedocs.io/en/latest/installation.html>`_ on how to download a local version
     of the validator.
 
     After that, you will need to add ``--local-validator`` option to the command string above.
@@ -216,7 +216,7 @@ To do this, we run the ``cubids purge`` command.
 ``cubids purge`` requires as input a list of files to cleanly "purge" from the dataset.
 You can create this file in any text editor,
 as long as it is saved as plain text ``.txt``.
-When specifying files in this text file, 
+When specifying files in this text file,
 always use relative paths starting from your BIDS directory.
 For this example, we created the following file:
 
@@ -321,7 +321,7 @@ based on acquisition fields such as dimension and voxel sizes, number of volumes
 
 While ``v0_validation.tsv`` identified all the BIDS validation errors present in the dataset,
 it did not identify any potential issues that might be present within the sidecars' metadata.
-Below, we see insances of missing metadata fields in a handful of sidecars,
+Below, we see instances of missing metadata fields in a handful of sidecars,
 which may impact successful execution of BIDS Apps.
 
 .. csv-table:: v0_summary.tsv