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Candidate for 2.1.1 #139

Merged
merged 17 commits into from
Sep 19, 2024
Merged

Candidate for 2.1.1 #139

merged 17 commits into from
Sep 19, 2024

Commits on Sep 18, 2024

  1. Made the hic param pattern more flexible

    @GallVp
    GallVp committed Sep 18, 2024
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  2. Fixed test matrix

    @GallVp
    GallVp committed Sep 18, 2024
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  3. Merge pull request #131 from Plant-Food-Research-Open/fix/hic_param 

    Made the `hic` param pattern more flexible
    @GallVp
    GallVp authored Sep 18, 2024
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  4. Updated modules to remove Bioconda defaults channel

    @GallVp
    GallVp committed Sep 18, 2024
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  5. Fixed flowchart syntax

    @GallVp
    GallVp committed Sep 18, 2024
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  6. Updated changelog

    @GallVp
    GallVp committed Sep 18, 2024
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Commits on Sep 19, 2024

  1. Merge pull request #133 from Plant-Food-Research-Open/update/modules 

    Updated modules to remove Bioconda `defaults` channel
    @GallVp
    GallVp authored Sep 19, 2024
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  2. Merge branch 'dev' into fix/flowchart

    @GallVp
    GallVp authored Sep 19, 2024
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  3. Merge pull request #134 from Plant-Food-Research-Open/fix/flowchart 

    Fixed flowchart syntax to remove '\n'
    @GallVp
    GallVp authored Sep 19, 2024
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  4. Now gff files for circular molecules can have end coordinates greater… 

    … than the sequence length
    @GallVp
    GallVp committed Sep 19, 2024
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  5. Merge pull request #136 from Plant-Food-Research-Open/fix/gff_validation 

    Now correctly validating gff files for circular sequences
    @GallVp
    GallVp authored Sep 19, 2024
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  6. Version bump to 2.1.1

    @GallVp
    GallVp committed Sep 19, 2024
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  7. Merge pull request #137 from Plant-Food-Research-Open/bump/2.1.1 

    Version bump to 2.1.1
    @GallVp
    GallVp authored Sep 19, 2024
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  8. Formatted mermaid chart

    @GallVp
    GallVp committed Sep 19, 2024
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  9. Merge pull request #138 from Plant-Food-Research-Open/format/mermaid 

    Formatted mermaid chart
    @GallVp
    GallVp authored Sep 19, 2024
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  10. Fixed the branch protection GitHub action

    @GallVp
    GallVp committed Sep 19, 2024
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  11. Merge pull request #140 from Plant-Food-Research-Open/fix/branch_protect 

    Fixed the branch protection GitHub action
    @GallVp
    GallVp authored Sep 19, 2024
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