Merge pull request #288 from RENCI/490-add-2-fields-to-study-profile-…

…csv-and-study-profile-report-on-screen

490 add 2 fields to study profile csv and study profile report on screen

.env.sample

@@ -33,4 +33,5 @@ REDCAP_URL_BASE=https://redcap.vanderbilt.edu/api/
 REDCAP_APPLICATION_TOKEN=faketoken
 DATA_DICTIONARY_INPUT_FILE_PATH=./redcap_data_dictionary_export.json
 DOWNLOAD_REDCAP_DATA_DICTIONARY=0
+CREATE_TABLES=1
 LOCAL_ENV=true

api/templates/study-profiles-template.csv

@@ -1,3 +1,3 @@
-Proposal ID,Network,Proposal Type,Does this proposal have any linked studies?,Study Design,Randomized?,Randomization Unit,Randomization Feature,Ascertainment,Observations,Is this a pilot study?,isRegistry,EHR Data Transfer?,EHR Data Transfer Option,Is consent required?,EFIC?,IRB Type,Regulatory Classification,ClinicalTrials.gov ID,Is DSMB/DMC Required?,Number of Initial Participating Sites,Enrollment Goal,Initial Projected Enrollment Duration,Lead PIs,Awardee Site Acronym,Primary funding type,Is this study funded primarily by infrastructure?,Was this study previously funded?
-ProposalID,network,type,linkedStudies,design,isRandomized,randomizationUnit,randomizationFeature,ascertainment,observations,isPilot,isRegistry,ehrDataTransfer,ehrDatatransferOption,isConsentRequired,isEfic,irbType,regulatoryClassification,clinicalTrialsGovId,isDsmbDmcRequired,initialParticipatingSiteCount,enrollmentGoal,initialProjectedEnrollmentDuration,leadPIs,awardeeSiteAcronym,primaryFundingType,isFundedPrimarilyByInfrastructure,isPreviouslyFunded
+Proposal ID,Network,Proposal Type,Does this proposal have any linked studies?,Study Design,Randomized?,Randomization Unit,Randomization Feature,Ascertainment,Observations,Is this a pilot study?,isRegistry,EHR Data Transfer?,EHR Data Transfer Option,Is consent required?,EFIC?,IRB Type,Regulatory Classification,ClinicalTrials.gov ID,Is DSMB/DMC Required?,Number of Initial Participating Sites,Enrollment Goal,Initial Projected Enrollment Duration,Lead PIs,Awardee Site Acronym,Primary funding type,Is this study funded primarily by infrastructure?,Was this study previously funded?, Contract Type,Number of Fields per Casebook
+ProposalID,network,type,linkedStudies,design,isRandomized,randomizationUnit,randomizationFeature,ascertainment,observations,isPilot,isRegistry,ehrDataTransfer,ehrDatatransferOption,isConsentRequired,isEfic,irbType,regulatoryClassification,clinicalTrialsGovId,isDsmbDmcRequired,initialParticipatingSiteCount,enrollmentGoal,initialProjectedEnrollmentDuration,leadPIs,awardeeSiteAcronym,primaryFundingType,isFundedPrimarilyByInfrastructure,isPreviouslyFunded,contractType,fieldsPerCasebook
 ,,,,,,,,,,,,,,,,,,,,,,,,,,,

docker-compose.prod.yml

@@ -48,6 +48,7 @@ services:
       PAUSE: $PAUSE
       DATA_INPUT_FILE_PATH: $DATA_INPUT_FILE_PATH
       DOWNLOAD_REDCAP_DATA: $DOWNLOAD_REDCAP_DATA
+      CREATE_TABLES: $CREATE_TABLES
       GLOBAL_WRITE_PERMISSIONS: $GLOBAL_WRITE_PERMISSIONS
     volumes:
       - $POSTGRES_DUMP_PATH:/backup

docker-compose.yml

@@ -48,6 +48,7 @@ services:
       PAUSE: $PAUSE
       DATA_INPUT_FILE_PATH: $DATA_INPUT_FILE_PATH
       DOWNLOAD_REDCAP_DATA: $DOWNLOAD_REDCAP_DATA
+      CREATE_TABLES: $CREATE_TABLES
       GLOBAL_WRITE_PERMISSIONS: $GLOBAL_WRITE_PERMISSIONS
       LOCAL_ENV: 'true'
     volumes:

mapping.json

@@ -7847,6 +7847,54 @@
     "Comments": "",
     "InitializeField": "no"
   },
+  {
+    "Fieldname_CTMD": "contractType",
+    "Fieldname_redcap": "n/a",
+    "Data Type": "text",
+    "Randomization_feature": "",
+    "Dropdown Options": "",
+    "Lookup Needed": "",
+    "Lookup Information": "",
+    "Algorithm": "",
+    "Key": "",
+    "Primary": "",
+    "Foreign": "",
+    "FK_tablename": "",
+    "Cardinality (Table_CTMD--FK_tablename)": "",
+    "Table_CTMD": "StudyProfile",
+    "Table_phase1": "n/a",
+    "NOT NULL": "FALSE",
+    "Default Value": "",
+    "Field Status": "New",
+    "Instrument": "n/a",
+    "Description": "The contract type for the study",
+    "Comments": "",
+    "InitializeField": "no"
+  },
+  {
+    "Fieldname_CTMD": "fieldsPerCasebook",
+    "Fieldname_redcap": "n/a",
+    "Data Type": "int",
+    "Randomization_feature": "",
+    "Dropdown Options": "",
+    "Lookup Needed": "",
+    "Lookup Information": "",
+    "Algorithm": "",
+    "Key": "",
+    "Primary": "",
+    "Foreign": "",
+    "FK_tablename": "",
+    "Cardinality (Table_CTMD--FK_tablename)": "",
+    "Table_CTMD": "StudyProfile",
+    "Table_phase1": "n/a",
+    "NOT NULL": "FALSE",
+    "Default Value": "",
+    "Field Status": "New",
+    "Instrument": "n/a",
+    "Description": "Number of fields per casebook",
+    "Comments": "",
+    "InitializeField": "no"
+  },
   {
     "Fieldname_CTMD": "ProposalID",
     "Fieldname_redcap": "proposal_id",