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Update index.md
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mconomos authored Jun 12, 2024
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| Time | Topic | Lecture | Tutorials/Exercises |
| --- | --- | --- | --- |
| 8:30am-10:00am | GWAS: Advanced Model Extenstions | [Slides](https://drive.google.com/file/d/1Fam4_KTQYRl20vANVkIbHm8TxgTLke5h/view?usp=drive_link) | [.Rmd](https://github.com/UW-GAC/SISG_2024/blob/main/03_advanced_GWAS.Rmd) \| [.html](https://htmlpreview.github.io/?https://github.com/UW-GAC/SISG_2024/blob/main/03_advanced_GWAS.html) |
| 8:30am-10:00am | GWAS: Advanced Model Extenstions | [Slides](https://drive.google.com/file/d/1BYIcH_i7-iyPIU--mqpWweEc4fEKr7CA/view?usp=drive_link) | [.Rmd](https://github.com/UW-GAC/SISG_2024/blob/main/03_advanced_GWAS.Rmd) \| [.html](https://htmlpreview.github.io/?https://github.com/UW-GAC/SISG_2024/blob/main/03_advanced_GWAS.html) |
| Extra | GENESIS Model Explorer Tutorial | | [.Rmd](https://github.com/UW-GAC/SISG_2024/blob/main/03.A_GENESIS_model_explorer.Rmd) \| [.html](https://htmlpreview.github.io/?https://github.com/UW-GAC/SISG_2024/blob/main/03.A_GENESIS_model_explorer.html)
| 10:00am-10:30am | _Coffee Break_ | | |
| 10:30am-12:00pm | Leveraging Multi-Ancestry Data: Lecture | [Slides](https://docs.google.com/presentation/d/1tXdJ1ti1kOBgQhD1M_LTB7WOQZ2r9HmJ/preview?slide=id.p1) |
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| --- | --- | --- | --- |
| 8:30am-10:00am | Variant Annotation: Part 2 <br> UCSC Genome Browser and FAVOR Tutorial | [Slides](https://docs.google.com/presentation/d/1W4A_XSPKwYSIJnzO9YmFh478CD4bT7Wv/preview?slide=id.p29) | [.docx](https://docs.google.com/document/d/1M1AeVvF0o7-g-ASouXGVXm96pf2ucxmI/preview) \| [chr16 SNPS](https://drive.google.com/file/d/1wIsk7rJlcfodfgQwLV-I8Ofh23GhqN5d/view?usp=drive_link) \| [KEY](https://docs.google.com/document/d/1PJcxgAPblVnGcfDsY_ns8A4mi8yFSshZ/preview) |
| 10:00am-10:30am | _Coffee Break_ | | |
| 10:30am-12:00pm | Multi-Variant Association Tests | [Slides](https://drive.google.com/file/d/1Gp2G-Lb7z44okN8twGpltBZR_zlQDUa7/view?usp=drive_link) | [.Rmd](https://github.com/UW-GAC/SISG_2024/blob/main/06_aggregate_tests.Rmd) \| [.html](https://htmlpreview.github.io/?https://github.com/UW-GAC/SISG_2024/blob/main/06_aggregate_tests.html)
| 10:30am-12:00pm | Multi-Variant Association Tests | [Slides](https://drive.google.com/file/d/1tSfrtT2TWA7MKtFRJUldZX-QWl-9Qc_Q/view?usp=drive_link) | [.Rmd](https://github.com/UW-GAC/SISG_2024/blob/main/06_aggregate_tests.Rmd) \| [.html](https://htmlpreview.github.io/?https://github.com/UW-GAC/SISG_2024/blob/main/06_aggregate_tests.html)
| 12:00pm-1:30pm | _Lunch Break_ | | |
| 1:30pm-3:00pm | STAAR | [Slides](https://docs.google.com/presentation/d/1svNLntJqOfqrwHhY3Gr39aON53pgz_0T/preview?slide=id.p1) | [.Rmd](https://github.com/UW-GAC/SISG_2024/blob/main/07_STAAR.Rmd) \| [.html](https://htmlpreview.github.io/?https://github.com/UW-GAC/SISG_2024/blob/main/07_STAAR.html) |
| 3:00pm-3:30pm | _Coffee Break_ | | |
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