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HiCUP v0.7.4
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@StevenWingett StevenWingett released this 19 Jun 13:30
· 108 commits to master since this release
v0.7.4
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Learn about vigilant mode.

-Fixed bug when specifying a cut-site containing an N (any nucleotide).
The script hicup_truncater used to incorporate such Ns into the FASTQ
truncated read. This is now fixed and no longer occurs.

-HiCUP now uses CIGAR string information when positioning reads to
restriction fragments and during the de-duplication process.

-Added scripts for GitHub Actions unit testing.

-Added a HiCUP Singularity recipe to the Misc folder.

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