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HiCUP v0.9.0

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@StevenWingett StevenWingett released this 14 Feb 17:58
· 23 commits to master since this release

HiCUP v0.9.0 is a major update incorporating the changes described below:

  • hicup2juicer script may now be passed the parameter --digest which
    enables users to retrieve the fragment ID instead of the dummy values
    0 and 1 (contributed by https://github.com/lldelisle)

  • hicup2juicer script may be passed the parameter --usemid which results
    in the position in the middle of the restriction fragment being
    reported instead of the 5' end
    (contributed by https://github.com/lldelisle).

  • Added scripts for processing SCRiBL datasets.