UCL-BLIC
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LearnBioinformatics
LearnBioinformatics PublicCompilation of resources to learn NGS data analysis
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crispr-parsr
crispr-parsr PublicSoftware to parse and analyse deletions (and insertions) from a CRISPR resequencing experiment
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Legion_toolkit
Legion_toolkit PublicGeneral scripts which make life easier when working on the Legion cluster at UCL
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rnaseq
rnaseq PublicForked from nf-core/rnaseq
RNA sequencing analysis pipeline using STAR or HISAT2, with gene counts and quality control
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Repositories
- Sarek_v2.2.1 Public Forked from nf-core/sarek
Detect germline or somatic variants from normal or tumour/normal whole-genome or targeted sequencing
UCL-BLIC/Sarek_v2.2.1’s past year of commit activity - chipseq Public Forked from nf-core/chipseq
Chromatin immunoprecipitation (ChIP-seq) analysis using BWA and MACS2 with QC steps.
UCL-BLIC/chipseq’s past year of commit activity - Sarek_v2.3.FIX1 Public
Detect germline or somatic variants from normal or tumour/normal whole-genome or targeted sequencing
UCL-BLIC/Sarek_v2.3.FIX1’s past year of commit activity