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Create GUI for configuring a Dataset and DAQ Systems for a Dataset #313

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Create GUI for configuring a Dataset and DAQ Systems for a Dataset #313

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ehennestad
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@ehennestad ehennestad commented Feb 11, 2025 •
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Before merging

  • Merge branch main_v1.1.0 into main before merging this PR

To try

% Install dependencies:
ndi_install(fullfile(userpath, 'tools'), 3)

% Open the dataset config wizard
NDIDatasetWizard('path/to/a/dataset')

Known issues:

Widgets Toolbox is a dependency of NANSEN, but not installed with NDI. See https://github.com/VervaekeLab/NANSEN?tab=readme-ov-file#required-community-toolboxes to install manully

Todo:

  • Folder Organisation - Select template does not work. Useful? Implement, or hide?

ehennestad and others added 30 commits June 7, 2024 20:28
@ehennestad
Fix indentation
2f03a0f
@ehennestad
Add functions for listing DAQ system component classes
411d1fc
@ehennestad
Add dependencies as utility functions and use correct function calls
ef07d4e
@ehennestad
Update DaqSystemConfiguration.m
07b15a4 
Change default value of "Name" from missing to blank string (missing does not serialize to json well)
Add method to get daq system using only device name
@ehennestad
Add DAQSystemConfigurator app and dependencies
0de251b
@ehennestad
Merge branch 'main' into ndi2beta-daq-system-config
8c10bcf
@ehennestad
Add code for NDI Dataset Wizard (work in progress)
c8cbf49
@ehennestad
Merge branch 'main' into ndi2beta-daq-system-config
ca06056
@ehennestad
Fix: Bugs in dataset wizard / folder organization page
3da12b2 
Fix various bugs arising from restructuring
@ehennestad
Merge branch 'main' into ndi2beta-daq-system-config
99b43ae
@stevevanhooser
abf
cded4b5
@stevevanhooser
more marder progress
44f5578
@stevevanhooser
updated
e706bbd
@stevevanhooser
latest import tools
933cfe3
@stevevanhooser
updated path
bf0edfb
@stevevanhooser
more marder lab import tools
58da3e0
@ehennestad
Fix: Wrong file extension for mltbx downloads
bc43732
@stevevanhooser
updates and demo
4f95ed1
@stevevanhooser
update demo
2adfc8e
@stevevanhooser
probe location lookup included in demo
9d55cbd
@ehennestad
Update probetype2object.json
611c6a1 
Fix typo
@ehennestad
Update probestruct2probetype - remove reliance on ndi.global
6dc20e5
@ehennestad
Add function for getting cached probe type map
2fccab2
@ehennestad
Create unittest for probes
368d03a
@ehennestad
Delete probetype2objectinit.m
47c8c6e
@ehennestad
Create PathConstants.m
11ba432
@ehennestad
Rename ndi_globals.path.path
9546660
@ehennestad
Rename ndi_globals.path.commonpath
ce8b926
@ehennestad
Rename ndi_globals.path.documentpath
713b623
@ehennestad
Rename ndi_globals.path.documentschemapath
70ff5d4
stevevanhooser and others added 30 commits December 12, 2024 10:01
@stevevanhooser
epoch as an object
31a9751
@stevevanhooser
Merge pull request #303 from VH-Lab/300-add-epoch-class-variant-B
0881d66 
Merge outlines for new epoch class
@ehennestad
Make getepocharray from static method epochtable2epocharray
4609a2b
@ehennestad
update docstring for previous commit
e7df2d4
@stevevanhooser
Merge pull request #305 from VH-Lab/300-add-epoch-class
b812145 
300 add epoch class
@ehennestad
Update element.m
e2ef257
@stevevanhooser
Merge pull request #306 from VH-Lab/306-add-heterogeneous-mixin-to-el…
5705f29 
…ement

Update element - Add Heterogeneous mixin and support 0-argument creation
@stevevanhooser
briggsStims
ddcce26
@ehennestad
Cache epochfilenames for epochnumber on navigator object (#308)
f792c01
@stevevanhooser
added new example code
9ffd25f
@stevevanhooser
updated examples, small bugs fixed
1fd41da
@stevevanhooser
Merge pull request #309 from VH-Lab/nielsen
6f14fa1 
Nielsen updates and new examples
@ehennestad
Replace try block with if/else
f159fb3
@stevevanhooser
adding mfdaqsysepoch2timetablestruct
6e2b195
@stevevanhooser
Merge pull request #311 from VH-Lab/mfdaqsys2timetable
15b1fbe 
adding mfdaqsysepoch2timetablestruct
@stevevanhooser
Merge pull request #310 from VH-Lab/navigator-epochid
b814cef 
Replace try block with if/else ndi.file.navigator/epochid
@ehennestad
Use cache to save "has_ingested_epoch" flag
996253e
@ehennestad
Fix and clean up previous commit
5daa8c3
@stevevanhooser
Merge pull request #312 from VH-Lab/308-improve-performance-read-epoc…
82210fa 
…h-timeseries

Improve performance for read epoch timeseries
@stevevanhooser
updated NDIC
c2c1a98
@stevevanhooser
small additions
1e07f83
@stevevanhooser
small edit
0c6699a
@stevevanhooser
updates with Uberon nodes being real now
abd59a6
@stevevanhooser
updates before talk
365bdd0
@stevevanhooser
new helper for docs: concatenateFiles
8118336
@stevevanhooser
bug fixes to concatenateFiles
55dd2de
@stevevanhooser
updates for Marder import, tests passing; syncgraph got too big in me…
36b62c7 
…mory with 1500x1500 epochs, fix made
@ehennestad
Merge branch 'main_v1.1.0' into ndi2beta-daq-system-config
5696782
@ehennestad
Remove ndi.globals dependency
7bd9811
@ehennestad
Add launcher for NDI DAQ System Configuration App
47a6a11
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3 participants
@ehennestad @stevevanhooser @gleverette