Skip to content

Navigation Menu

abdenlab

Explore
By company size
By use case
By industry
View all solutions
Topics
- AI
- DevOps
- Security
- Software Development
- View all
Explore
- GitHub Sponsors
  Fund open source developers
- The ReadME Project
  GitHub community articles
Repositories
- Enterprise platform
  AI-powered developer platform
Available add-ons
Pricing

Search code, repositories, users, issues, pull requests...

Search

Clear

Search syntax tips

Provide feedback

We read every piece of feedback, and take your input very seriously.

Include my email address so I can be contacted

Saved searches

Use saved searches to filter your results more quickly

Name

Query

To see all available qualifiers, see our documentation.

You signed in with another tab or window. Reload to refresh your session. You signed out in another tab or window. Reload to refresh your session. You switched accounts on another tab or window. Reload to refresh your session.

Dismiss alert

Abdennur Lab

Lab for Genomic Data Science

11 followers
https://abdenlab.org

Overview
Repositories
Projects
Packages
People

More

Overview
Repositories
Projects
Packages
People

Pinned Loading

oxbow oxbow Public

Read specialized NGS formats as data frames in R, Python, and more.

Rust 61 8
dask-ngs dask-ngs Public

Scalable access to bioinformatics data with Dask and Oxbow

Python 1 3
VCFormer VCFormer Public

Read and flatten VCF data into DataFrames

Python 3
ipylangchat ipylangchat Public

Simple Jupyter chat UI for LangChain

Jupyter Notebook 11 2

Repositories

Loading

Type

Select type

All Public Sources Forks Archived Mirrors Templates

Language

Select language

All C++ HTML JavaScript Jupyter Notebook Python Rust

Sort

Select order

Last updated Name Stars

Showing 10 of 14 repositories

ldsc-python3 Public Forked from bulik/ldsc
LD Score Regression (LDSC)

abdenlab/ldsc-python3’s past year of commit activity

Python 0 GPL-3.0 349 0 2 Updated Oct 31, 2024
snakemake-executor-plugin-lsf Public Forked from BEFH/snakemake-executor-plugin-lsf
A Snakemake executor plugin for submitting jobs to a LSF cluster

abdenlab/snakemake-executor-plugin-lsf’s past year of commit activity

Python 0 MIT 4 0 1 Updated Aug 7, 2024
ipylangchat Public
Simple Jupyter chat UI for LangChain

abdenlab/ipylangchat’s past year of commit activity

Jupyter Notebook 11 MIT 2 0 1 Updated Jul 3, 2024
oxbow Public
Read specialized NGS formats as data frames in R, Python, and more.

abdenlab/oxbow’s past year of commit activity

Rust 61 Apache-2.0 8 9 4 Updated Jun 30, 2024
eigen-tour Public

abdenlab/eigen-tour’s past year of commit activity

JavaScript 1 MIT 1 0 1 Updated May 19, 2024
deepC Public Forked from rschwess/deepC
A neural network framework for predicting the Hi-C chromatin interactions from megabase scale DNA sequence

abdenlab/deepC’s past year of commit activity

HTML 0 GPL-3.0 12 0 0 Updated Apr 12, 2024
dask-ngs Public
Scalable access to bioinformatics data with Dask and Oxbow

abdenlab/dask-ngs’s past year of commit activity

Python 1 MIT 3 1 5 Updated Mar 4, 2024
4dn-hg-jscatter-demo Public

abdenlab/4dn-hg-jscatter-demo’s past year of commit activity

Jupyter Notebook 2 0 0 1 Updated Mar 1, 2024
VCFormer Public
Read and flatten VCF data into DataFrames

abdenlab/VCFormer’s past year of commit activity

Python 3 MIT 0 0 0 Updated Aug 11, 2023
inspectro-nf-thomas Public Forked from open2c/inspectro-nf

abdenlab/inspectro-nf-thomas’s past year of commit activity

Python 0 2 0 0 Updated Jul 11, 2023

View all repositories

People

Top languages

Loading…

Most used topics

Loading…

Footer

© 2024 GitHub, Inc.

Footer navigation

Terms
Privacy
Security
Status
Docs
Contact

You can’t perform that action at this time.