Python library bug fix - v1.2.1 (#160)

* Fixed a bug with start coordinate conversion leading to empty values in python library writer class. * Updated python library NEWS.
airr-community · Oct 5, 2018 · 26e0cf9 · 26e0cf9
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diff --git a/lang/python/NEWS.rst b/lang/python/NEWS.rst
@@ -1,3 +1,9 @@
+Version 1.2.1:  October 5, 2018
+--------------------------------------------------------------------------------
+
++ Fixed a bug in the python reference library causing start coordinate values
+  to be empty in some cases when writing data.
+
 Version 1.2.0:  August 17, 2018
 --------------------------------------------------------------------------------
 

diff --git a/lang/python/airr/io.py b/lang/python/airr/io.py
@@ -218,7 +218,7 @@ def write(self, row):
             # Adjust coordinates
             if f.endswith('_start') and self.base == 1:
                 try:
-                    row[f] = row[f] + 1
+                    row[f] = self.schema.to_int(row[f]) + 1
                 except TypeError:
                     row[f] = None