Dataset refactoring part1 #430
Workflow file for this run
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| name: Transfer Learning Tests (GPU) | |
| on: | |
| push: | |
| branches: ["dev", "refactoring"] | |
| pull_request: | |
| branches: ["dev", "refactoring"] | |
| types: [opened, synchronize, reopened, ready_for_review] | |
| permissions: | |
| contents: read | |
| concurrency: | |
| group: '${{ github.workflow }} @ ${{ github.event.pull_request.head.label || github.head_ref || github.ref }}' | |
| cancel-in-progress: true | |
| env: | |
| POETRY_VERSION: '1.8.3' | |
| PYTHON_VERSION: '3.11' | |
| jobs: | |
| test-transfer-learning-gpu: | |
| if: github.event.pull_request.draft == false | |
| runs-on: | |
| - self-hosted | |
| - Linux | |
| - ubuntu | |
| - gpu | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: snok/install-poetry@v1 | |
| with: | |
| version: ${{ env.POETRY_VERSION }} | |
| virtualenvs-create: false | |
| - uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ env.PYTHON_VERSION }} | |
| - name: Run tests for Transfer Learning on GPU | |
| run: | | |
| source "${HOME}/miniconda3/etc/profile.d/conda.sh" | |
| make env.conda | |
| conda activate "${{ github.workspace }}"/env | |
| make install | |
| cd tests | |
| poetry run pytest \ | |
| --junitxml=./test-reports/test_transfer_learning_report.xml \ | |
| --disable-warnings \ | |
| --verbose \ | |
| --basetemp=$HOME/actions_runner_workdir/transfer_learning \ | |
| --input_data_directory=/mnt/data/clinicadl_data_ci/data_ci \ | |
| test_transfer_learning.py | |
| - name: Cleaning | |
| run: | | |
| rm -rf $HOME/actions_runner_workdir/transfer_learning/* |