Update generate.py

biopragmatics · Feb 2, 2024 · 1afe4b7 · 1afe4b7
1 parent f292ff9
commit 1afe4b7
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/lexica/phenotype/generate.py b/lexica/phenotype/generate.py
@@ -30,9 +30,9 @@
                 # TODO should there be others?
             ],
         ),
-        biolexica.Input(source="efo", processor="pyobo"),  # TODO find subset of EFO
+        biolexica.Input(source="efo", processor="pyobo", ancestors=["EFO:0000408"]),
+        biolexica.Input(source="ncit", processor="pyobo", ancestors=["ncit:C2991"]),
         # biolexica.Input(source="umls", processor="pyobo"), # TODO find subset of UMLS
-        # biolexica.Input(source="ncit", processor="pyobo"), # TODO find subset of NCIT
     ],
     excludes=["doid:4"],
 )