chore: Updated compiled documentation [skip ci]

biosimulators · Sep 25, 2024 · 5ce1030 · 5ce1030
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diff --git a/docs/_static/documentation_options.js b/docs/_static/documentation_options.js
@@ -1,5 +1,5 @@
 const DOCUMENTATION_OPTIONS = {
-    VERSION: '0.2.0',
+    VERSION: '0.2.1',
     LANGUAGE: 'en',
     COLLAPSE_INDEX: false,
     BUILDER: 'html',

diff --git a/docs/about.html b/docs/about.html
@@ -8,7 +8,7 @@
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" /><meta name="viewport" content="width=device-width, initial-scale=1" />
 
-    <title>About BioSimulators utils &#8212; BioSimulators utils 0.2.0 documentation</title>
+    <title>About BioSimulators utils &#8212; BioSimulators utils 0.2.1 documentation</title>
 
 
 
@@ -36,7 +36,7 @@
 <link rel="preload" as="script" href="_static/scripts/pydata-sphinx-theme.js?digest=dfe6caa3a7d634c4db9b" />
   <script src="_static/vendor/fontawesome/6.5.2/js/all.min.js?digest=dfe6caa3a7d634c4db9b"></script>
 
-    <script src="_static/documentation_options.js?v=938c9ccc"></script>
+    <script src="_static/documentation_options.js?v=37f418d5"></script>
     <script src="_static/doctools.js?v=9a2dae69"></script>
     <script src="_static/sphinx_highlight.js?v=dc90522c"></script>
     <script>DOCUMENTATION_OPTIONS.pagename = 'about';</script>
@@ -124,8 +124,8 @@
 
 
 
-    <img src="_static/biosimulators-logo.svg" class="logo__image only-light" alt="BioSimulators utils 0.2.0 documentation - Home"/>
-    <script>document.write(`<img src="_static/biosimulators-logo.svg" class="logo__image only-dark" alt="BioSimulators utils 0.2.0 documentation - Home"/>`);</script>
+    <img src="_static/biosimulators-logo.svg" class="logo__image only-light" alt="BioSimulators utils 0.2.1 documentation - Home"/>
+    <script>document.write(`<img src="_static/biosimulators-logo.svg" class="logo__image only-dark" alt="BioSimulators utils 0.2.1 documentation - Home"/>`);</script>
 
 
 </a></div>

diff --git a/docs/genindex.html b/docs/genindex.html
@@ -7,7 +7,7 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>Index &#8212; BioSimulators utils 0.2.0 documentation</title>
+    <title>Index &#8212; BioSimulators utils 0.2.1 documentation</title>
 
 
 
@@ -35,7 +35,7 @@
 <link rel="preload" as="script" href="_static/scripts/pydata-sphinx-theme.js?digest=dfe6caa3a7d634c4db9b" />
   <script src="_static/vendor/fontawesome/6.5.2/js/all.min.js?digest=dfe6caa3a7d634c4db9b"></script>
 
-    <script src="_static/documentation_options.js?v=938c9ccc"></script>
+    <script src="_static/documentation_options.js?v=37f418d5"></script>
     <script src="_static/doctools.js?v=9a2dae69"></script>
     <script src="_static/sphinx_highlight.js?v=dc90522c"></script>
     <script>DOCUMENTATION_OPTIONS.pagename = 'genindex';</script>
@@ -121,8 +121,8 @@
 
 
 
-    <img src="_static/biosimulators-logo.svg" class="logo__image only-light" alt="BioSimulators utils 0.2.0 documentation - Home"/>
-    <script>document.write(`<img src="_static/biosimulators-logo.svg" class="logo__image only-dark" alt="BioSimulators utils 0.2.0 documentation - Home"/>`);</script>
+    <img src="_static/biosimulators-logo.svg" class="logo__image only-light" alt="BioSimulators utils 0.2.1 documentation - Home"/>
+    <script>document.write(`<img src="_static/biosimulators-logo.svg" class="logo__image only-dark" alt="BioSimulators utils 0.2.1 documentation - Home"/>`);</script>
 
 
 </a></div>
@@ -2228,10 +2228,10 @@ <h2 id="I">I</h2>
 </li>
       <li><a href="source/biosimulators_utils.log.html#biosimulators_utils.log.utils.init_task_log">init_task_log() (in module biosimulators_utils.log.utils)</a>
 </li>
-  </ul></td>
-  <td style="width: 33%; vertical-align: top;"><ul>
       <li><a href="source/biosimulators_utils.sedml.html#biosimulators_utils.sedml.data_model.UniformTimeCourseSimulation.initial_time">initial_time (biosimulators_utils.sedml.data_model.UniformTimeCourseSimulation attribute)</a>
 </li>
+  </ul></td>
+  <td style="width: 33%; vertical-align: top;"><ul>
       <li><a href="source/biosimulators_utils.utils.html#biosimulators_utils.utils.identifiers_org.IdentifiersOrgNamespaceResource.institution">institution (biosimulators_utils.utils.identifiers_org.IdentifiersOrgNamespaceResource attribute)</a>
 </li>
       <li><a href="source/biosimulators_utils.html#biosimulators_utils.data_model.ValueType.integer">integer (biosimulators_utils.data_model.ValueType attribute)</a>
@@ -2344,6 +2344,8 @@ <h2 id="I">I</h2>
         <li><a href="source/biosimulators_utils.simulator_registry.html#biosimulators_utils.simulator_registry.data_model.SimulatorSubmission.is_equal">(biosimulators_utils.simulator_registry.data_model.SimulatorSubmission method)</a>
 </li>
       </ul></li>
+      <li><a href="source/biosimulators_utils.sedml.html#biosimulators_utils.sedml.utils.is_executable_task">is_executable_task() (in module biosimulators_utils.sedml.utils)</a>
+</li>
       <li><a href="source/biosimulators_utils.sedml.html#biosimulators_utils.sedml.utils.is_model_language_encoded_in_xml">is_model_language_encoded_in_xml() (in module biosimulators_utils.sedml.utils)</a>
 </li>
       <li><a href="source/biosimulators_utils.licensing.html#biosimulators_utils.licensing.core.LicenseManager.is_package_available">is_package_available() (biosimulators_utils.licensing.core.LicenseManager method)</a>

diff --git a/docs/index.html b/docs/index.html
@@ -8,7 +8,7 @@
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" /><meta name="viewport" content="width=device-width, initial-scale=1" />
 
-    <title>BioSimulators utils documentation &#8212; BioSimulators utils 0.2.0 documentation</title>
+    <title>BioSimulators utils documentation &#8212; BioSimulators utils 0.2.1 documentation</title>
 
 
 
@@ -36,7 +36,7 @@
 <link rel="preload" as="script" href="_static/scripts/pydata-sphinx-theme.js?digest=dfe6caa3a7d634c4db9b" />
   <script src="_static/vendor/fontawesome/6.5.2/js/all.min.js?digest=dfe6caa3a7d634c4db9b"></script>
 
-    <script src="_static/documentation_options.js?v=938c9ccc"></script>
+    <script src="_static/documentation_options.js?v=37f418d5"></script>
     <script src="_static/doctools.js?v=9a2dae69"></script>
     <script src="_static/sphinx_highlight.js?v=dc90522c"></script>
     <script>DOCUMENTATION_OPTIONS.pagename = 'index';</script>
@@ -123,8 +123,8 @@
 
 
 
-    <img src="_static/biosimulators-logo.svg" class="logo__image only-light" alt="BioSimulators utils 0.2.0 documentation - Home"/>
-    <script>document.write(`<img src="_static/biosimulators-logo.svg" class="logo__image only-dark" alt="BioSimulators utils 0.2.0 documentation - Home"/>`);</script>
+    <img src="_static/biosimulators-logo.svg" class="logo__image only-light" alt="BioSimulators utils 0.2.1 documentation - Home"/>
+    <script>document.write(`<img src="_static/biosimulators-logo.svg" class="logo__image only-dark" alt="BioSimulators utils 0.2.1 documentation - Home"/>`);</script>
 
 
 </a></div>

diff --git a/docs/installation.html b/docs/installation.html
@@ -8,7 +8,7 @@
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" /><meta name="viewport" content="width=device-width, initial-scale=1" />
 
-    <title>Installation instructions &#8212; BioSimulators utils 0.2.0 documentation</title>
+    <title>Installation instructions &#8212; BioSimulators utils 0.2.1 documentation</title>
 
 
 
@@ -36,7 +36,7 @@
 <link rel="preload" as="script" href="_static/scripts/pydata-sphinx-theme.js?digest=dfe6caa3a7d634c4db9b" />
   <script src="_static/vendor/fontawesome/6.5.2/js/all.min.js?digest=dfe6caa3a7d634c4db9b"></script>
 
-    <script src="_static/documentation_options.js?v=938c9ccc"></script>
+    <script src="_static/documentation_options.js?v=37f418d5"></script>
     <script src="_static/doctools.js?v=9a2dae69"></script>
     <script src="_static/sphinx_highlight.js?v=dc90522c"></script>
     <script>DOCUMENTATION_OPTIONS.pagename = 'installation';</script>
@@ -124,8 +124,8 @@
 
 
 
-    <img src="_static/biosimulators-logo.svg" class="logo__image only-light" alt="BioSimulators utils 0.2.0 documentation - Home"/>
-    <script>document.write(`<img src="_static/biosimulators-logo.svg" class="logo__image only-dark" alt="BioSimulators utils 0.2.0 documentation - Home"/>`);</script>
+    <img src="_static/biosimulators-logo.svg" class="logo__image only-light" alt="BioSimulators utils 0.2.1 documentation - Home"/>
+    <script>document.write(`<img src="_static/biosimulators-logo.svg" class="logo__image only-dark" alt="BioSimulators utils 0.2.1 documentation - Home"/>`);</script>
 
 
 </a></div>

diff --git a/docs/py-modindex.html b/docs/py-modindex.html
@@ -7,7 +7,7 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>Python Module Index &#8212; BioSimulators utils 0.2.0 documentation</title>
+    <title>Python Module Index &#8212; BioSimulators utils 0.2.1 documentation</title>
 
 
 
@@ -35,7 +35,7 @@
 <link rel="preload" as="script" href="_static/scripts/pydata-sphinx-theme.js?digest=dfe6caa3a7d634c4db9b" />
   <script src="_static/vendor/fontawesome/6.5.2/js/all.min.js?digest=dfe6caa3a7d634c4db9b"></script>
 
-    <script src="_static/documentation_options.js?v=938c9ccc"></script>
+    <script src="_static/documentation_options.js?v=37f418d5"></script>
     <script src="_static/doctools.js?v=9a2dae69"></script>
     <script src="_static/sphinx_highlight.js?v=dc90522c"></script>
     <script>DOCUMENTATION_OPTIONS.pagename = 'py-modindex';</script>
@@ -124,8 +124,8 @@
 
 
 
-    <img src="_static/biosimulators-logo.svg" class="logo__image only-light" alt="BioSimulators utils 0.2.0 documentation - Home"/>
-    <script>document.write(`<img src="_static/biosimulators-logo.svg" class="logo__image only-dark" alt="BioSimulators utils 0.2.0 documentation - Home"/>`);</script>
+    <img src="_static/biosimulators-logo.svg" class="logo__image only-light" alt="BioSimulators utils 0.2.1 documentation - Home"/>
+    <script>document.write(`<img src="_static/biosimulators-logo.svg" class="logo__image only-dark" alt="BioSimulators utils 0.2.1 documentation - Home"/>`);</script>
 
 
 </a></div>

diff --git a/docs/search.html b/docs/search.html
@@ -6,7 +6,7 @@
 
   <head>
     <meta charset="utf-8" />
-    <meta name="viewport" content="width=device-width, initial-scale=1.0" /><title>Search - BioSimulators utils 0.2.0 documentation</title>
+    <meta name="viewport" content="width=device-width, initial-scale=1.0" /><title>Search - BioSimulators utils 0.2.1 documentation</title>
 
 
 
@@ -34,7 +34,7 @@
 <link rel="preload" as="script" href="_static/scripts/pydata-sphinx-theme.js?digest=dfe6caa3a7d634c4db9b" />
   <script src="_static/vendor/fontawesome/6.5.2/js/all.min.js?digest=dfe6caa3a7d634c4db9b"></script>
 
-    <script src="_static/documentation_options.js?v=938c9ccc"></script>
+    <script src="_static/documentation_options.js?v=37f418d5"></script>
     <script src="_static/doctools.js?v=9a2dae69"></script>
     <script src="_static/sphinx_highlight.js?v=dc90522c"></script>
     <script>DOCUMENTATION_OPTIONS.pagename = 'search';</script>
@@ -123,8 +123,8 @@
 
 
 
-    <img src="_static/biosimulators-logo.svg" class="logo__image only-light" alt="BioSimulators utils 0.2.0 documentation - Home"/>
-    <script>document.write(`<img src="_static/biosimulators-logo.svg" class="logo__image only-dark" alt="BioSimulators utils 0.2.0 documentation - Home"/>`);</script>
+    <img src="_static/biosimulators-logo.svg" class="logo__image only-light" alt="BioSimulators utils 0.2.1 documentation - Home"/>
+    <script>document.write(`<img src="_static/biosimulators-logo.svg" class="logo__image only-dark" alt="BioSimulators utils 0.2.1 documentation - Home"/>`);</script>
 
 
 </a></div>

diff --git a/docs/searchindex.js b/docs/searchindex.js
diff --git a/docs/source/biosimulators_utils.archive.html b/docs/source/biosimulators_utils.archive.html
@@ -8,7 +8,7 @@
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" /><meta name="viewport" content="width=device-width, initial-scale=1" />
 
-    <title>biosimulators_utils.archive package &#8212; BioSimulators utils 0.2.0 documentation</title>
+    <title>biosimulators_utils.archive package &#8212; BioSimulators utils 0.2.1 documentation</title>
 
 
 
@@ -36,7 +36,7 @@
 <link rel="preload" as="script" href="../_static/scripts/pydata-sphinx-theme.js?digest=dfe6caa3a7d634c4db9b" />
   <script src="../_static/vendor/fontawesome/6.5.2/js/all.min.js?digest=dfe6caa3a7d634c4db9b"></script>
 
-    <script src="../_static/documentation_options.js?v=938c9ccc"></script>
+    <script src="../_static/documentation_options.js?v=37f418d5"></script>
     <script src="../_static/doctools.js?v=9a2dae69"></script>
     <script src="../_static/sphinx_highlight.js?v=dc90522c"></script>
     <script>DOCUMENTATION_OPTIONS.pagename = 'source/biosimulators_utils.archive';</script>
@@ -124,8 +124,8 @@
 
 
 
-    <img src="../_static/biosimulators-logo.svg" class="logo__image only-light" alt="BioSimulators utils 0.2.0 documentation - Home"/>
-    <script>document.write(`<img src="../_static/biosimulators-logo.svg" class="logo__image only-dark" alt="BioSimulators utils 0.2.0 documentation - Home"/>`);</script>
+    <img src="../_static/biosimulators-logo.svg" class="logo__image only-light" alt="BioSimulators utils 0.2.1 documentation - Home"/>
+    <script>document.write(`<img src="../_static/biosimulators-logo.svg" class="logo__image only-dark" alt="BioSimulators utils 0.2.1 documentation - Home"/>`);</script>
 
 
 </a></div>

diff --git a/docs/source/biosimulators_utils.biosimulations.html b/docs/source/biosimulators_utils.biosimulations.html
@@ -8,7 +8,7 @@
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" /><meta name="viewport" content="width=device-width, initial-scale=1" />
 
-    <title>biosimulators_utils.biosimulations package &#8212; BioSimulators utils 0.2.0 documentation</title>
+    <title>biosimulators_utils.biosimulations package &#8212; BioSimulators utils 0.2.1 documentation</title>
 
 
 
@@ -36,7 +36,7 @@
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   <script src="../_static/vendor/fontawesome/6.5.2/js/all.min.js?digest=dfe6caa3a7d634c4db9b"></script>
 
-    <script src="../_static/documentation_options.js?v=938c9ccc"></script>
+    <script src="../_static/documentation_options.js?v=37f418d5"></script>
     <script src="../_static/doctools.js?v=9a2dae69"></script>
     <script src="../_static/sphinx_highlight.js?v=dc90522c"></script>
     <script>DOCUMENTATION_OPTIONS.pagename = 'source/biosimulators_utils.biosimulations';</script>
@@ -124,8 +124,8 @@
 
 
 
-    <img src="../_static/biosimulators-logo.svg" class="logo__image only-light" alt="BioSimulators utils 0.2.0 documentation - Home"/>
-    <script>document.write(`<img src="../_static/biosimulators-logo.svg" class="logo__image only-dark" alt="BioSimulators utils 0.2.0 documentation - Home"/>`);</script>
+    <img src="../_static/biosimulators-logo.svg" class="logo__image only-light" alt="BioSimulators utils 0.2.1 documentation - Home"/>
+    <script>document.write(`<img src="../_static/biosimulators-logo.svg" class="logo__image only-dark" alt="BioSimulators utils 0.2.1 documentation - Home"/>`);</script>
 
 
 </a></div>

diff --git a/docs/source/biosimulators_utils.combine.html b/docs/source/biosimulators_utils.combine.html
@@ -8,7 +8,7 @@
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" /><meta name="viewport" content="width=device-width, initial-scale=1" />
 
-    <title>biosimulators_utils.combine package &#8212; BioSimulators utils 0.2.0 documentation</title>
+    <title>biosimulators_utils.combine package &#8212; BioSimulators utils 0.2.1 documentation</title>
 
 
 
@@ -36,7 +36,7 @@
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   <script src="../_static/vendor/fontawesome/6.5.2/js/all.min.js?digest=dfe6caa3a7d634c4db9b"></script>
 
-    <script src="../_static/documentation_options.js?v=938c9ccc"></script>
+    <script src="../_static/documentation_options.js?v=37f418d5"></script>
     <script src="../_static/doctools.js?v=9a2dae69"></script>
     <script src="../_static/sphinx_highlight.js?v=dc90522c"></script>
     <script>DOCUMENTATION_OPTIONS.pagename = 'source/biosimulators_utils.combine';</script>
@@ -124,8 +124,8 @@
 
 
 
-    <img src="../_static/biosimulators-logo.svg" class="logo__image only-light" alt="BioSimulators utils 0.2.0 documentation - Home"/>
-    <script>document.write(`<img src="../_static/biosimulators-logo.svg" class="logo__image only-dark" alt="BioSimulators utils 0.2.0 documentation - Home"/>`);</script>
+    <img src="../_static/biosimulators-logo.svg" class="logo__image only-light" alt="BioSimulators utils 0.2.1 documentation - Home"/>
+    <script>document.write(`<img src="../_static/biosimulators-logo.svg" class="logo__image only-dark" alt="BioSimulators utils 0.2.1 documentation - Home"/>`);</script>
 
 
 </a></div>

diff --git a/docs/source/biosimulators_utils.gh_action.html b/docs/source/biosimulators_utils.gh_action.html
@@ -8,7 +8,7 @@
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" /><meta name="viewport" content="width=device-width, initial-scale=1" />
 
-    <title>biosimulators_utils.gh_action package &#8212; BioSimulators utils 0.2.0 documentation</title>
+    <title>biosimulators_utils.gh_action package &#8212; BioSimulators utils 0.2.1 documentation</title>
 
 
 
@@ -36,7 +36,7 @@
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-    <script src="../_static/documentation_options.js?v=938c9ccc"></script>
+    <script src="../_static/documentation_options.js?v=37f418d5"></script>
     <script src="../_static/doctools.js?v=9a2dae69"></script>
     <script src="../_static/sphinx_highlight.js?v=dc90522c"></script>
     <script>DOCUMENTATION_OPTIONS.pagename = 'source/biosimulators_utils.gh_action';</script>
@@ -124,8 +124,8 @@
 
 
 
-    <img src="../_static/biosimulators-logo.svg" class="logo__image only-light" alt="BioSimulators utils 0.2.0 documentation - Home"/>
-    <script>document.write(`<img src="../_static/biosimulators-logo.svg" class="logo__image only-dark" alt="BioSimulators utils 0.2.0 documentation - Home"/>`);</script>
+    <img src="../_static/biosimulators-logo.svg" class="logo__image only-light" alt="BioSimulators utils 0.2.1 documentation - Home"/>
+    <script>document.write(`<img src="../_static/biosimulators-logo.svg" class="logo__image only-dark" alt="BioSimulators utils 0.2.1 documentation - Home"/>`);</script>
 
 
 </a></div>