updated data model for config

biosimulator_processes/data_model.py

@@ -198,15 +198,13 @@ class ProcessConfigSchema(BaseModel):
     config: Dict = Field(default={})
 
 
-class CopasiProcessConfigSchema(BaseModel):
+class ProcessConfig(BaseModel):
     process_name: str
-    method: str = Field(default='deterministic')
-    model: Union[TimeCourseModel, Dict]
 
-    def __init__(self, **data):
-        super().__init__(**data)
-        if isinstance(self.model, TimeCourseModel):
-            self.model = self.model.model_dump()
+
+class CopasiProcessConfig(ProcessConfig):
+    method: str = Field(default='deterministic')
+    model: TimeCourseModel
 
     # @field_serializer('model', when_used='json')
     # @classmethod
@@ -235,7 +233,6 @@ class ProcessInstance(BaseModel):
     config: Union[CopasiProcessConfigSchema, ProcessConfigSchema]
     inputs: PortSchema
     outputs: PortSchema
-    emitter: Union[EmitterInstance, NoneType] = Field(default=None)
 
     @classmethod
     @field_validator('address')

biosimulator_processes/processes/copasi_process.py

@@ -35,7 +35,7 @@
 # )
 from process_bigraph import Process, Composite, pf
 from biosimulator_processes.utils import fetch_biomodel
-from biosimulator_processes.data_model import TimeCourseProcessConfigSchema
+from biosimulator_processes.data_model import TimeCourseProcessConfigSchema, CopasiProcessConfig
 
 
 class CopasiProcess(Process):
@@ -81,7 +81,7 @@ class CopasiProcess(Process):
 
     config_schema = TimeCourseProcessConfigSchema().model_dump()
 
-    def __init__(self, config=None, core=None):
+    def __init__(self, config: CopasiProcessConfig=None, core=None):
         super().__init__(config, core)
 
         model_source = self.config['model']['model_source']['value']