ERROR: Could not find one and only one picard.jar in deployment.

[gabriella-quinn]

Is there anyway that I can specify one PATH to picard? I am on an HPC with an institution and I am assuming that is why I am having this issue. Below is what I have tried and the error that I get from it.

conda activate omics
conda install picard
conda install bioconda::dropseq_tools

bash Drop-seq_alignment.sh \

-g <genomepath.>
-r <referencefasta.fa>
-o <dir.>
P10_SI_S1_L001_R1.bam

ERROR: Could not find one and only one picard.jar in deployment.

[alecw]

Hi @gabriella-quinn ,

What version of the tools are you using?

Run this command in the directory in which you have deployed the tools, and send the output:

find ./ -name 'picard*.jar'