Fix Terra CleanVcf templates

broadinstitute · Jan 18, 2024 · 6789cd2 · 6789cd2
1 parent a08e0c5
commit 6789cd2
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Showing 2 changed files with 4 additions and 4 deletions.
diff --git a/...lates/terra_workspaces/cohort_mode/workflow_configurations/CleanVcf.SingleBatch.json.tmpl b/...lates/terra_workspaces/cohort_mode/workflow_configurations/CleanVcf.SingleBatch.json.tmpl
@@ -22,7 +22,7 @@
   "CleanVcf.cohort_name": "${this.sample_set_id}",
   "CleanVcf.ped_file": "${workspace.cohort_ped_file}",
   "CleanVcf.complex_genotype_vcfs": "${this.complex_genotype_vcfs}",
-  "CleanVcf.complex_resolve_bothside_pass_lists": "${this.complex_resolve_bothside_pass_lists}",
-  "CleanVcf.complex_resolve_background_fail_lists": "${this.complex_resolve_background_fail_lists}"
+  "CleanVcf.complex_resolve_bothside_pass_list": "${this.complex_resolve_bothside_pass_list}",
+  "CleanVcf.complex_resolve_background_fail_list": "${this.complex_resolve_background_fail_list}"
 
 }
diff --git a/inputs/templates/terra_workspaces/cohort_mode/workflow_configurations/CleanVcf.json.tmpl b/inputs/templates/terra_workspaces/cohort_mode/workflow_configurations/CleanVcf.json.tmpl
@@ -22,7 +22,7 @@
   "CleanVcf.cohort_name": "${this.sample_set_set_id}",
   "CleanVcf.ped_file": "${workspace.cohort_ped_file}",
   "CleanVcf.complex_genotype_vcfs": "${this.complex_genotype_vcfs}",
-  "CleanVcf.complex_resolve_bothside_pass_lists": "${this.complex_resolve_bothside_pass_lists}",
-  "CleanVcf.complex_resolve_background_fail_lists": "${this.complex_resolve_background_fail_lists}"
+  "CleanVcf.complex_resolve_bothside_pass_list": "${this.complex_resolve_bothside_pass_list}",
+  "CleanVcf.complex_resolve_background_fail_list": "${this.complex_resolve_background_fail_list}"
 
 }